Difference between revisions of "Tiso gene 19952"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MANNKIN-RXN MANNKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** hexokinase * ec number:...")
(Created page with "Category:Gene == Gene Tiso_gene_19952 == * right end position: ** 1678 * transcription direction: ** POSITIVE * left end position: ** 389 * centisome position: ** 20.52770...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MANNKIN-RXN MANNKIN-RXN] ==
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== Gene Tiso_gene_19952 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 1678
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* common name:
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* transcription direction:
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** hexokinase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/2.7.1.7 EC-2.7.1.7]
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** 389
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* centisome position:
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** 20.527704   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PEPTIDYLPROLYL-ISOMERASE-RXN]]
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** 1 [[ATP]][c] '''+''' 1 [[D-mannopyranose]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-15979]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 ATP[c] '''+''' 1 D-mannopyranose[c] '''=>''' 1 ADP[c] '''+''' 1 H+[c] '''+''' 1 D-mannopyranose 6-phosphate[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_3107]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_1303]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways  ==
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* [[PWY-6140]], CMP-2-keto-3-deoxy-D-glycero-D-galacto-nononate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6140 PWY-6140]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6992]], 1,5-anhydrofructose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6992 PWY-6992]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-3861]], mannitol degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3861 PWY-3861]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[creinhardtii]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=1678}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11028 11028]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=389}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01326 R01326]
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{{#set: centisome position=20.527704    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=PEPTIDYLPROLYL-ISOMERASE-RXN}}
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{{#set: common name=hexokinase}}
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{{#set: ec number=EC-2.7.1.7}}
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{{#set: gene associated=Tiso_gene_3107|Tiso_gene_1303}}
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{{#set: in pathway=PWY-6140|PWY-6992|PWY-3861}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 19:47, 21 March 2018

Gene Tiso_gene_19952

  • right end position:
    • 1678
  • transcription direction:
    • POSITIVE
  • left end position:
    • 389
  • centisome position:
    • 20.527704
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_19952&oldid=43717"