Difference between revisions of "NAGLIPASYN-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=BTUR2-RXN BTUR2-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=NAGLIPASYN-PWY NAGLIPASYN-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=BTUR2-RXN BTUR2-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=NAGLIPASYN-PWY NAGLIPASYN-PWY] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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* ec number:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://enzyme.expasy.org/EC/2.5.1.17 EC-2.5.1.17]
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* common name:
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** lipid IVA biosynthesis
 
* Synonym(s):
 
* Synonym(s):
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** lipid-A-precursor biosynthesis
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''5''' reactions found over '''6''' reactions in the full pathway
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** 1 [[COBINAMIDE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[P3I]][c] '''+''' 1 [[ADENOSYLCOBINAMIDE]][c]
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* [[LIPIDADISACCHARIDESYNTH-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 cobinamide[c] '''+''' 1 ATP[c] '''=>''' 1 PPPi[c] '''+''' 1 adenosylcobinamide[c]
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*** [[Tiso_gene_6736]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[TETRAACYLDISACC4KIN-RXN]]
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* [[Tiso_gene_6190]]
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** 2 associated gene(s):
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** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_8779]]
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== Pathways  ==
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*** [[Tiso_gene_8780]]
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* [[COBALSYN-PWY]], adenosylcobalamin salvage from cobinamide I: [http://metacyc.org/META/NEW-IMAGE?object=COBALSYN-PWY COBALSYN-PWY]
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** 1 reconstruction source(s) associated:
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** '''2''' reactions found over '''6''' reactions in the full pathway
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*** [[annotation-in-silico_annotation]]
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* [[PWY-6269]], adenosylcobalamin salvage from cobinamide II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6269 PWY-6269]
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* [[UDPACYLGLCNACDEACETYL-RXN]]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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** 1 associated gene(s):
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== Reconstruction information  ==
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*** [[Tiso_gene_19583]]
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* [[orthology]]:
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** 1 reconstruction source(s) associated:
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** [[pantograph]]:
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*** [[orthology-synechocystis]]
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*** [[esiliculosus]]
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* [[UDPHYDROXYMYRGLUCOSAMNACETYLTRANS-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_2638]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-synechocystis]]
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* [[UDPNACETYLGLUCOSAMACYLTRANS-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_19198]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-synechocystis]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=LIPIDXSYNTHESIS-RXN LIPIDXSYNTHESIS-RXN]
 
== External links  ==
 
== External links  ==
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* RHEA:
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* ECOCYC:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14725 14725]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=NAGLIPASYN-PWY NAGLIPASYN-PWY]
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-33090}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07268 R07268]
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{{#set: taxonomic range=TAX-2}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=lipid IVA biosynthesis}}
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{{#set: ec number=EC-2.5.1.17}}
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{{#set: common name=lipid-A-precursor biosynthesis}}
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{{#set: gene associated=Tiso_gene_6190}}
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{{#set: reaction found=5}}
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{{#set: in pathway=COBALSYN-PWY|PWY-6269}}
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{{#set: total reaction=6}}
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{{#set: reconstruction category=orthology}}
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{{#set: completion rate=83.0}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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Latest revision as of 19:47, 21 March 2018

Pathway NAGLIPASYN-PWY

  • taxonomic range:
  • common name:
    • lipid IVA biosynthesis
  • Synonym(s):
    • lipid-A-precursor biosynthesis

Reaction(s) found

5 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=NAGLIPASYN-PWY&oldid=43788"