Difference between revisions of "PWY-6854"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14199 RXN-14199] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec number: ** [http:/...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6854 PWY-6854] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Category:Reaction]]
+
[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14199 RXN-14199] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6854 PWY-6854] ==
* direction:
+
* taxonomic range:
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
** ORF
+
** ethylene biosynthesis III (microbes)
* ec number:
+
** [http://enzyme.expasy.org/EC/3.6.1.5 EC-3.6.1.5]
+
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
+
== Reaction(s) found ==
* With identifiers:
+
'''3''' reactions found over '''7''' reactions in the full pathway
** 1 [[DUTP]][c] '''+''' 2 [[WATER]][c] '''=>''' 2 [[PROTON]][c] '''+''' 1 [[DUMP]][c] '''+''' 2 [[Pi]][c]
+
* [[RXN-12540]]
* With common name(s):
+
** 0 associated gene:
** 1 dUTP[c] '''+''' 2 H2O[c] '''=>''' 2 H+[c] '''+''' 1 dUMP[c] '''+''' 2 phosphate[c]
+
** 2 reconstruction source(s) associated:
 
+
*** [[annotation-in-silico_annotation]]
== Genes associated with this reaction  ==
+
*** [[annotation-experimental_annotation]]
Genes have been associated with this reaction based on different elements listed below.
+
* [[RXN-12541]]
* [[Tiso_gene_12899]]
+
** 0 associated gene:
** IN-SILICO_ANNOTATION
+
** 1 reconstruction source(s) associated:
***EC-NUMBER
+
*** [[annotation-in-silico_annotation]]
** EXPERIMENTAL_ANNOTATION
+
* [[SUPEROX-DISMUT-RXN]]
***EC-NUMBER
+
** 5 associated gene(s):
* [[Tiso_gene_20236]]
+
*** [[Tiso_gene_3587]]
** [[pantograph]]-[[esiliculosus]]
+
*** [[Tiso_gene_15757]]
== Pathways  ==
+
*** [[Tiso_gene_12651]]
== Reconstruction information  ==
+
*** [[Tiso_gene_20023]]
* [[orthology]]:
+
*** [[Tiso_gene_12652]]
** [[pantograph]]:
+
** 4 reconstruction source(s) associated:
*** [[esiliculosus]]
+
*** [[annotation-in-silico_annotation]]
* [[annotation]]:
+
*** [[annotation-experimental_annotation]]
** [[pathwaytools]]:
+
*** [[orthology-synechocystis]]
*** [[experimental_annotation]]
+
*** [[orthology-esiliculosus]]
*** [[in-silico_annotation]]
+
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=FERRIC-CHELATE-REDUCTASE-RXN FERRIC-CHELATE-REDUCTASE-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=R15-RXN R15-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12539 RXN-12539]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14960 RXN-14960]
 
== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: taxonomic range=TAX-4751}}
{{#set: common name=ORF}}
+
{{#set: taxonomic range=TAX-2}}
{{#set: ec number=EC-3.6.1.5}}
+
{{#set: common name=ethylene biosynthesis III (microbes)}}
{{#set: gene associated=Tiso_gene_12899|Tiso_gene_20236}}
+
{{#set: reaction found=3}}
{{#set: in pathway=}}
+
{{#set: total reaction=7}}
{{#set: reconstruction category=orthology}}
+
{{#set: completion rate=43.0}}
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=esiliculosus}}
+
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Latest revision as of 19:47, 21 March 2018

Pathway PWY-6854

  • taxonomic range:
  • common name:
    • ethylene biosynthesis III (microbes)
  • Synonym(s):

Reaction(s) found

3 reactions found over 7 reactions in the full pathway

Reaction(s) not found

External links