Difference between revisions of "Tiso gene 3610"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRROLINECARBDEHYDROG-RXN PYRROLINECARBDEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * common name...")
(Created page with "Category:Gene == Gene Tiso_gene_3610 == * right end position: ** 9137 * transcription direction: ** NEGATIVE * left end position: ** 6998 * centisome position: ** 42.83004...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRROLINECARBDEHYDROG-RXN PYRROLINECARBDEHYDROG-RXN] ==
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== Gene Tiso_gene_3610 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 9137
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* common name:
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* transcription direction:
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** 1-pyrroline-5-carboxylate dehydrogenase
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** NEGATIVE
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** ORF
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* left end position:
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** delta-1-pyrroline-5-carboxylate_dehydrogenase_mitochondrial
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** 6998
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** delta-1-pyrroline-5-carboxylate_synthase
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* centisome position:
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** 42.83004   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[5.99.1.3-RXN]]
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** 1 [[L-DELTA1-PYRROLINE_5-CARBOXYLATE]][c] '''+''' 2 [[WATER]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[GLT]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 (S)-1-pyrroline-5-carboxylate[c] '''+''' 2 H2O[c] '''+''' 1 NAD+[c] '''=>''' 1 NADH[c] '''+''' 1 H+[c] '''+''' 1 L-glutamate[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_18338]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_6952]]
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** [[pantograph]]-[[synechocystis]]
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* [[Tiso_gene_7381]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_886]]
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** [[pantograph]]-[[synechocystis]]
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* [[Tiso_gene_9680]]
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** [[pantograph]]-[[synechocystis]]
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* [[Tiso_gene_18337]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_16634]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_3513]]
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** [[pantograph]]-[[synechocystis]]
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== Pathways ==
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[synechocystis]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=9137}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16417 16417]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: left end position=6998}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00707 R00707]
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{{#set: centisome position=42.83004    }}
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* UNIPROT:
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{{#set: reaction associated=5.99.1.3-RXN}}
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** [http://www.uniprot.org/uniprot/Q9ZN12 Q9ZN12]
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** [http://www.uniprot.org/uniprot/Q9PMG0 Q9PMG0]
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** [http://www.uniprot.org/uniprot/P09546 P09546]
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** [http://www.uniprot.org/uniprot/Q9JSY1 Q9JSY1]
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** [http://www.uniprot.org/uniprot/Q9K0Z9 Q9K0Z9]
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** [http://www.uniprot.org/uniprot/O24897 O24897]
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** [http://www.uniprot.org/uniprot/Q59426 Q59426]
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** [http://www.uniprot.org/uniprot/P07275 P07275]
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** [http://www.uniprot.org/uniprot/P10503 P10503]
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** [http://www.uniprot.org/uniprot/P74275 P74275]
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** [http://www.uniprot.org/uniprot/O74766 O74766]
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** [http://www.uniprot.org/uniprot/P95629 P95629]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=1-pyrroline-5-carboxylate dehydrogenase}}
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{{#set: common name=ORF}}
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{{#set: common name=delta-1-pyrroline-5-carboxylate_dehydrogenase_mitochondrial}}
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{{#set: common name=delta-1-pyrroline-5-carboxylate_synthase}}
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{{#set: gene associated=Tiso_gene_18338|Tiso_gene_6952|Tiso_gene_7381|Tiso_gene_886|Tiso_gene_9680|Tiso_gene_18337|Tiso_gene_16634|Tiso_gene_3513}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=synechocystis}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 19:48, 21 March 2018

Gene Tiso_gene_3610

  • right end position:
    • 9137
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 6998
  • centisome position:
    • 42.83004
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_3610&oldid=43829"