Difference between revisions of "BSUBPOLYAMSYN-PWY"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SHIKIMATE SHIKIMATE] == * smiles: ** C1(=C(CC(C(O)C(O)1)O)C(=O)[O-]) * inchi key: ** InChIKey=J...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=BSUBPOLYAMSYN-PWY BSUBPOLYAMSYN-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?obje...")
 
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[[Category:Metabolite]]
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[[Category:Pathway]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SHIKIMATE SHIKIMATE] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=BSUBPOLYAMSYN-PWY BSUBPOLYAMSYN-PWY] ==
* smiles:
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* taxonomic range:
** C1(=C(CC(C(O)C(O)1)O)C(=O)[O-])
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
* inchi key:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
** InChIKey=JXOHGGNKMLTUBP-HSUXUTPPSA-M
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
 
* common name:
 
* common name:
** shikimate
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** spermidine biosynthesis I
* molecular weight:
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** 173.145   
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* Synonym(s):
 
* Synonym(s):
** shikimic acid
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** arginine degradation to spermidine
** (3R,4S,5R)--3,4,5-trihydroxycyclohex-1-ene-1-carboxylate
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** spermidine biosynthesis
  
== Reaction(s) known to consume the compound ==
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== Reaction(s) found ==
* [[RXN-7968]]
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'''2''' reactions found over '''2''' reactions in the full pathway
== Reaction(s) known to produce the compound ==
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* [[SAMDECARB-RXN]]
* [[SHIKIMATE-5-DEHYDROGENASE-RXN]]
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** 2 associated gene(s):
== Reaction(s) of unknown directionality ==
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*** [[Tiso_gene_4269]]
* [[SHIKIMATE-KINASE-RXN]]
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*** [[Tiso_gene_11030]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[SPERMIDINESYN-RXN]]
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** 4 associated gene(s):
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*** [[Tiso_gene_17803]]
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*** [[Tiso_gene_16717]]
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*** [[Tiso_gene_16718]]
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*** [[Tiso_gene_17081]]
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** 4 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-creinhardtii]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
* CAS : 138-59-0
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* ECOCYC:
* PUBCHEM:
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=BSUBPOLYAMSYN-PWY BSUBPOLYAMSYN-PWY]
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=7057976 7057976]
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* ARACYC:
* HMDB : HMDB03070
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** [http://metacyc.org/ARA/NEW-IMAGE?object=BSUBPOLYAMSYN-PWY BSUBPOLYAMSYN-PWY]
* LIGAND-CPD:
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{{#set: taxonomic range=TAX-2759}}
** [http://www.genome.jp/dbget-bin/www_bget?C00493 C00493]
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{{#set: taxonomic range=TAX-2}}
* CHEMSPIDER:
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{{#set: taxonomic range=TAX-2157}}
** [http://www.chemspider.com/Chemical-Structure.5414360.html 5414360]
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{{#set: common name=spermidine biosynthesis I}}
* CHEBI:
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{{#set: common name=arginine degradation to spermidine|spermidine biosynthesis}}
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=36208 36208]
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{{#set: reaction found=2}}
* BIGG : skm
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{{#set: total reaction=2}}
{{#set: smiles=C1(=C(CC(C(O)C(O)1)O)C(=O)[O-])}}
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{{#set: completion rate=100.0}}
{{#set: inchi key=InChIKey=JXOHGGNKMLTUBP-HSUXUTPPSA-M}}
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{{#set: common name=shikimate}}
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{{#set: molecular weight=173.145    }}
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{{#set: common name=shikimic acid|(3R,4S,5R)--3,4,5-trihydroxycyclohex-1-ene-1-carboxylate}}
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{{#set: consumed by=RXN-7968}}
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{{#set: produced by=SHIKIMATE-5-DEHYDROGENASE-RXN}}
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{{#set: consumed or produced by=SHIKIMATE-KINASE-RXN}}
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Latest revision as of 19:48, 21 March 2018

Pathway BSUBPOLYAMSYN-PWY

  • taxonomic range:
  • common name:
    • spermidine biosynthesis I
  • Synonym(s):
    • arginine degradation to spermidine
    • spermidine biosynthesis

Reaction(s) found

2 reactions found over 2 reactions in the full pathway

Reaction(s) not found

External links