Difference between revisions of "Tiso gene 20000"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5063 RXN0-5063] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Gene == Gene Tiso_gene_20000 == * right end position: ** 1742 * transcription direction: ** POSITIVE * left end position: ** 60 * centisome position: ** 3.2258062...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5063 RXN0-5063] ==
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== Gene Tiso_gene_20000 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 1742
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/2.8.4.3 EC-2.8.4.3]
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** POSITIVE
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* left end position:
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** 60
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* centisome position:
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** 3.2258062   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[1.2.1.13-RXN]]
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** 1 [[6-Dimethylallyladenosine37-tRNAs]][c] '''+''' 1 [[Sulfurated-Sulfur-Acceptors]][c] '''+''' 2 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[Donor-H2]][c] '''=>''' 1 [[CH33ADO]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[Unsulfurated-Sulfur-Acceptors]][c] '''+''' 1 [[Acceptor]][c] '''+''' 1 [[MET]][c] '''+''' 1 [[CPD-11592]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 N6-dimethylallyladenosine37 in tRNA[c] '''+''' 1 a sulfurated [sulfur carrier][c] '''+''' 2 S-adenosyl-L-methionine[c] '''+''' 1 a reduced electron acceptor[c] '''=>''' 1 5'-deoxyadenosine[c] '''+''' 2 H+[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 an unsulfurated [sulfur carrier][c] '''+''' 1 an oxidized electron acceptor[c] '''+''' 1 L-methionine[c] '''+''' 1 2-methylthio-N6-dimethylallyladenosine37 in tRNA[c]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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== Genes associated with this reaction  ==
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* Reaction: [[GAPDHSYNEC-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[annotation-experimental_annotation]]
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* [[Tiso_gene_12431]]
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*** Assignment: automated-name-match
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** [[pantograph]]-[[esiliculosus]]
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* Reaction: [[GAPOXNPHOSPHN-RXN]]
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== Pathways  ==
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** Source: [[orthology-athaliana]]
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== Reconstruction information  ==
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** Source: [[orthology-athaliana]]
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* [[orthology]]:
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** Source: [[orthology-synechocystis]]
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** [[pantograph]]:
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** Source: [[orthology-esiliculosus]]
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*** [[esiliculosus]]
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** Source: [[orthology-creinhardtii]]
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** Source: [[orthology-creinhardtii]]
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* Reaction: [[TRIOSEPISOMERIZATION-RXN]]
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** Source: [[orthology-esiliculosus]]
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== Pathways associated ==
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* [[PWY-1042]]
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* [[P341-PWY]]
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* [[PWY66-399]]
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* [[PWY66-373]]
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* [[GLUCONEO-PWY]]
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* [[GLYCOLYSIS]]
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* [[PWY-6901]]
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* [[SUCSYN-PWY]]
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* [[P124-PWY]]
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* [[PWY-6142]]
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* [[CALVIN-PWY]]
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* [[ANAGLYCOLYSIS-PWY]]
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* [[PWY-5484]]
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* [[P185-PWY]]
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* [[P122-PWY]]
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* [[PWY-7003]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=1742}}
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{{#set: ec number=EC-2.8.4.3}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: gene associated=Tiso_gene_12431}}
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{{#set: left end position=60}}
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{{#set: in pathway=}}
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{{#set: centisome position=3.2258062    }}
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{{#set: reconstruction category=orthology}}
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{{#set: reaction associated=1.2.1.13-RXN|GAPDHSYNEC-RXN|GAPOXNPHOSPHN-RXN|TRIOSEPISOMERIZATION-RXN}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: pathway associated=PWY-1042|P341-PWY|PWY66-399|PWY66-373|GLUCONEO-PWY|GLYCOLYSIS|PWY-6901|SUCSYN-PWY|P124-PWY|PWY-6142|CALVIN-PWY|ANAGLYCOLYSIS-PWY|PWY-5484|P185-PWY|P122-PWY|PWY-7003}}
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{{#set: reconstruction source=esiliculosus}}
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Latest revision as of 19:49, 21 March 2018

Gene Tiso_gene_20000

  • right end position:
    • 1742
  • transcription direction:
    • POSITIVE
  • left end position:
    • 60
  • centisome position:
    • 3.2258062
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_20000&oldid=44002"