Difference between revisions of "Tiso gene 743"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUC1PURIDYLTRANS-RXN GLUC1PURIDYLTRANS-RXN] == * direction: ** REVERSIBLE * common name: ** utp--g...")
 
(Created page with "Category:Gene == Gene Tiso_gene_743 == * right end position: ** 23716 * transcription direction: ** NEGATIVE * left end position: ** 18842 * centisome position: ** 65.0621...")
 
(4 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUC1PURIDYLTRANS-RXN GLUC1PURIDYLTRANS-RXN] ==
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== Gene Tiso_gene_743 ==
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* direction:
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* right end position:
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** REVERSIBLE
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** 23716
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* common name:
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* transcription direction:
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** utp--glucose-1-phosphate_uridylyltransferase
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** NEGATIVE
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** dp-n-acetylglucosamine_pyrophosphorylase
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* left end position:
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** f-box_lrr-repeat_protein_13-like
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** 18842
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/2.7.7.64 EC-2.7.7.64]
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** 65.06216   
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** [http://enzyme.expasy.org/EC/2.7.7.9 EC-2.7.7.9]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ADENYLOSUCCINATE-SYNTHASE-RXN]]
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** 1 [[GLC-1-P]][c] '''+''' 1 [[UTP]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[CPD-12575]][c] '''+''' 1 [[PPI]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 &alpha;-D-glucopyranose 1-phosphate[c] '''+''' 1 UTP[c] '''+''' 1 H+[c] '''<=>''' 1 UDP-&alpha;-D-glucose[c] '''+''' 1 diphosphate[c]
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** Source: [[orthology-synechocystis]]
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** Source: [[orthology-esiliculosus]]
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== Genes associated with this reaction  ==
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** Source: [[orthology-creinhardtii]]
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[orthology-creinhardtii]]
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* [[Tiso_gene_14796]]
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== Pathways associated ==
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** IN-SILICO_ANNOTATION
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* [[PWY-7219]]
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_4816]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_6457]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_11401]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_17531]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_6458]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_6459]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_13477]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_5879]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_16930]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_17566]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_7102]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_9110]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_7440]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways ==
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* [[PWY-7817]], type I lipoteichoic acid biosynthesis (S. aureus): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7817 PWY-7817]
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** '''7''' reactions found over '''16''' reactions in the full pathway
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* [[PWY-7343]], UDP-glucose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7343 PWY-7343]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-6527]], stachyose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6527 PWY-6527]
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** '''7''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7238]], sucrose biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7238 PWY-7238]
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** '''6''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-3801]], sucrose degradation II (sucrose synthase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3801 PWY-3801]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[athaliana]]
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=23716}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19889 19889]
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{{#set: transcription direction=NEGATIVE}}
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* PIR:
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{{#set: left end position=18842}}
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A40650 A40650]
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{{#set: centisome position=65.06216    }}
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A41382 A41382]
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{{#set: reaction associated=ADENYLOSUCCINATE-SYNTHASE-RXN}}
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A56146 A56146]
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{{#set: pathway associated=PWY-7219}}
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A64250 A64250]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A64970 A64970]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A75096 A75096]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=D49349 D49349]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=D69184 D69184]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=D70601 D70601]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=E64466 E64466]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=E71913 E71913]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=F59102 F59102]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=F64600 F64600]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=F81300 F81300]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=G64095 G64095]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=G70125 G70125]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=H70446 H70446]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JC2265 JC2265]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JC4785 JC4785]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JC4985 JC4985]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JX0277 JX0277]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S15298 S15298]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S30007 S30007]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S31431 S31431]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S35692 S35692]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S41533 S41533]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S62599 S62599]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S73501 S73501]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S78541 S78541]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T42521 T42521]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T44841 T44841]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T45453 T45453]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XNDOU XNDOU]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XNPOU XNPOU]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R00289 R00289]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/Q05852 Q05852]
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** [http://www.uniprot.org/uniprot/P27897 P27897]
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** [http://www.uniprot.org/uniprot/Q48447 Q48447]
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** [http://www.uniprot.org/uniprot/P47691 P47691]
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** [http://www.uniprot.org/uniprot/P0AAB6 P0AAB6]
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** [http://www.uniprot.org/uniprot/Q9UZI7 Q9UZI7]
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** [http://www.uniprot.org/uniprot/P33696 P33696]
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** [http://www.uniprot.org/uniprot/O26731 O26731]
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** [http://www.uniprot.org/uniprot/O05576 O05576]
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** [http://www.uniprot.org/uniprot/Q58730 Q58730]
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** [http://www.uniprot.org/uniprot/Q9ZLI8 Q9ZLI8]
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** [http://www.uniprot.org/uniprot/Q9X364 Q9X364]
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** [http://www.uniprot.org/uniprot/O25363 O25363]
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** [http://www.uniprot.org/uniprot/Q9PMD3 Q9PMD3]
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** [http://www.uniprot.org/uniprot/P44878 P44878]
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** [http://www.uniprot.org/uniprot/O51225 O51225]
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** [http://www.uniprot.org/uniprot/O67602 O67602]
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** [http://www.uniprot.org/uniprot/P0AEP3 P0AEP3]
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** [http://www.uniprot.org/uniprot/Q43772 Q43772]
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** [http://www.uniprot.org/uniprot/P74969 P74969]
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** [http://www.uniprot.org/uniprot/Q07130 Q07130]
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** [http://www.uniprot.org/uniprot/P32861 P32861]
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** [http://www.uniprot.org/uniprot/P19595 P19595]
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** [http://www.uniprot.org/uniprot/Q07131 Q07131]
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** [http://www.uniprot.org/uniprot/P37776 P37776]
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** [http://www.uniprot.org/uniprot/P75124 P75124]
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** [http://www.uniprot.org/uniprot/Q46768 Q46768]
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** [http://www.uniprot.org/uniprot/P78811 P78811]
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** [http://www.uniprot.org/uniprot/Q9RMC3 Q9RMC3]
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** [http://www.uniprot.org/uniprot/Q9Z5G1 Q9Z5G1]
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** [http://www.uniprot.org/uniprot/P08800 P08800]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=utp--glucose-1-phosphate_uridylyltransferase}}
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{{#set: common name=dp-n-acetylglucosamine_pyrophosphorylase}}
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{{#set: common name=f-box_lrr-repeat_protein_13-like}}
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{{#set: ec number=EC-2.7.7.64}}
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{{#set: ec number=EC-2.7.7.9}}
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{{#set: gene associated=Tiso_gene_14796|Tiso_gene_4816|Tiso_gene_6457|Tiso_gene_11401|Tiso_gene_17531|Tiso_gene_6458|Tiso_gene_6459|Tiso_gene_13477|Tiso_gene_5879|Tiso_gene_16930|Tiso_gene_17566|Tiso_gene_7102|Tiso_gene_9110|Tiso_gene_7440}}
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{{#set: in pathway=PWY-7817|PWY-7343|PWY-6527|PWY-7238|PWY-3801}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=athaliana|esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 19:17, 21 March 2018

Gene Tiso_gene_743

  • right end position:
    • 23716
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 18842
  • centisome position:
    • 65.06216
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_743&oldid=40701"