Difference between revisions of "PWY-5108"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9615 RXN-9615] == * direction: ** LEFT-TO-RIGHT * common name: ** ammonium_transporter * Synony...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5108 PWY-5108] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-224756 TAX-...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9615 RXN-9615] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5108 PWY-5108] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-224756 TAX-224756]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183925 TAX-183925]
 
* common name:
 
* common name:
** ammonium_transporter
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** L-isoleucine biosynthesis V
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''2''' reactions found over '''3''' reactions in the full pathway
** 1 [[AMMONIUM]][e] '''=>''' 1 [[AMMONIUM]][c]
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* [[2KETO-3METHYLVALERATE-RXN]]
* With common name(s):
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** 3 associated gene(s):
** 1 ammonium[e] '''=>''' 1 ammonium[c]
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*** [[Tiso_gene_3260]]
 
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*** [[Tiso_gene_18084]]
== Genes associated with this reaction  ==
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*** [[Tiso_gene_11793]]
Genes have been associated with this reaction based on different elements listed below.
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** 1 reconstruction source(s) associated:
* [[Tiso_gene_19566]]
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*** [[orthology-creinhardtii]]
** IN-SILICO_ANNOTATION
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* [[BRANCHED-CHAINAMINOTRANSFERILEU-RXN]]
***AUTOMATED-NAME-MATCH
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** 3 associated gene(s):
** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_14984]]
* [[Tiso_gene_18753]]
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*** [[Tiso_gene_18403]]
** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_17748]]
***AUTOMATED-NAME-MATCH
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** 7 reconstruction source(s) associated:
** [[pantograph]]-[[esiliculosus]]
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*** [[annotation-experimental_annotation]]
* [[Tiso_gene_19246]]
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*** [[orthology-esiliculosus]]
** IN-SILICO_ANNOTATION
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*** [[annotation-in-silico_annotation]]
***AUTOMATED-NAME-MATCH
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*** [[orthology-athaliana]]
** [[pantograph]]-[[esiliculosus]]
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*** [[orthology-synechocystis]]
== Pathways  ==
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*** [[manual-primary_network]]
== Reconstruction information  ==
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*** [[orthology-creinhardtii]]
* [[orthology]]:
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== Reaction(s) not found ==
** [[pantograph]]:
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7764 RXN-7764]
*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
* RHEA:
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{{#set: taxonomic range=TAX-224756}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28747 28747]
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{{#set: taxonomic range=TAX-2}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-183925}}
{{#set: common name=ammonium_transporter}}
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{{#set: common name=L-isoleucine biosynthesis V}}
{{#set: gene associated=Tiso_gene_19566|Tiso_gene_18753|Tiso_gene_19246}}
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{{#set: reaction found=2}}
{{#set: in pathway=}}
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{{#set: total reaction=3}}
{{#set: reconstruction category=orthology}}
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{{#set: completion rate=67.0}}
{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 19:18, 21 March 2018

Pathway PWY-5108

Reaction(s) found

2 reactions found over 3 reactions in the full pathway

Reaction(s) not found

External links