Difference between revisions of "URACIL-PRIBOSYLTRANS-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_19350 == * left end position: ** 639 * transcription direction: ** POSITIVE * right end position: ** 2388 * centisome position: ** 26.69172...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=URACIL-PRIBOSYLTRANS-RXN URACIL-PRIBOSYLTRANS-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_19350 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=URACIL-PRIBOSYLTRANS-RXN URACIL-PRIBOSYLTRANS-RXN] ==
−
* left end position:
+
* direction:
−
** 639
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** POSITIVE
+
** uracil_phosphoribosyltransferase
−
* right end position:
+
* ec number:
−
** 2388
+
** [http://enzyme.expasy.org/EC/2.4.2.9 EC-2.4.2.9]
−
* centisome position:
+
−
** 26.691729   
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[ATPASE-RXN]]
+
* With identifiers:
−
** in-silico_annotation
+
** 1 [[URACIL]][c] '''+''' 1 [[PRPP]][c] '''=>''' 1 [[UMP]][c] '''+''' 1 [[PPI]][c]
−
***ec-number
+
* With common name(s):
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
** 1 uracil[c] '''+''' 1 5-phospho-α-D-ribose 1-diphosphate[c] '''=>''' 1 UMP[c] '''+''' 1 diphosphate[c]
−
** in-silico_annotation
+
 
−
***ec-number
+
== Genes associated with this reaction  ==
−
* [[RXN-12195]]
+
Genes have been associated with this reaction based on different elements listed below.
−
** in-silico_annotation
+
* Gene: [[Tiso_gene_10462]]
−
***ec-number
+
** Source: [[annotation-in-silico_annotation]]
−
* [[RXN-12196]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** in-silico_annotation
+
** Source: [[orthology-athaliana]]
−
***ec-number
+
** Source: [[orthology-creinhardtii]]
−
* [[RXN0-5462]]
+
* Gene: [[Tiso_gene_14867]]
−
** in-silico_annotation
+
** Source: [[annotation-in-silico_annotation]]
−
***ec-number
+
*** Assignment: AUTOMATED-NAME-MATCH
−
== Pathways associated ==
+
** Source: [[orthology-esiliculosus]]
−
* [[PWY-7184]]
+
== Pathways  ==
−
* [[PWY-7198]]
+
* [[PWY-7183]], pyrimidine nucleobases salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7183 PWY-7183]
−
* [[PWY-6545]]
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-7210]]
+
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-creinhardtii]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=639}}
+
* RHEA:
−
{{#set: transcription direction=POSITIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13017 13017]
−
{{#set: right end position=2388}}
+
* LIGAND-RXN:
−
{{#set: centisome position=26.691729    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00966 R00966]
−
{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
+
* UNIPROT:
−
{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
+
** [http://www.uniprot.org/uniprot/P0A8F0 P0A8F0]
 +
** [http://www.uniprot.org/uniprot/P39765 P39765]
 +
** [http://www.uniprot.org/uniprot/Q9CEC9 Q9CEC9]
 +
** [http://www.uniprot.org/uniprot/P47276 P47276]
 +
** [http://www.uniprot.org/uniprot/O27186 O27186]
 +
** [http://www.uniprot.org/uniprot/P43857 P43857]
 +
** [http://www.uniprot.org/uniprot/O67914 O67914]
 +
** [http://www.uniprot.org/uniprot/P44722 P44722]
 +
** [http://www.uniprot.org/uniprot/Q9PN13 Q9PN13]
 +
** [http://www.uniprot.org/uniprot/P65941 P65941]
 +
** [http://www.uniprot.org/uniprot/P39149 P39149]
 +
** [http://www.uniprot.org/uniprot/P18562 P18562]
 +
** [http://www.uniprot.org/uniprot/P41007 P41007]
 +
** [http://www.uniprot.org/uniprot/P72753 P72753]
 +
** [http://www.uniprot.org/uniprot/Q55758 Q55758]
 +
** [http://www.uniprot.org/uniprot/P93394 P93394]
 +
** [http://www.uniprot.org/uniprot/O65583 O65583]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=uracil_phosphoribosyltransferase}}
 +
{{#set: ec number=EC-2.4.2.9}}
 +
{{#set: gene associated=Tiso_gene_10462|Tiso_gene_14867}}
 +
{{#set: in pathway=PWY-7183}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=orthology-creinhardtii|orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:54, 21 March 2018

Reaction URACIL-PRIBOSYLTRANS-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • uracil_phosphoribosyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 uracil[c] + 1 5-phospho-α-D-ribose 1-diphosphate[c] => 1 UMP[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7183, pyrimidine nucleobases salvage I: PWY-7183
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=URACIL-PRIBOSYLTRANS-RXN&oldid=44567"