Difference between revisions of "RXN-10625"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.11.2-RXN 3.4.11.2-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** aminopeptidase_n ** m...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10625 RXN-10625] == * direction: ** LEFT-TO-RIGHT * common name: ** geranylgeranyl_diphosphate_...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.11.2-RXN 3.4.11.2-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10625 RXN-10625] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** aminopeptidase_n
+
** geranylgeranyl_diphosphate_reductase
−
** membrane_aminopeptidase_i
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.4.11.2 EC-3.4.11.2]
+
** [http://enzyme.expasy.org/EC/1.3.1.83 EC-1.3.1.83]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[POLYPEPTIDE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[L-Amino-Acids]][c] '''+''' 1 [[POLYPEPTIDE]][c]
+
** 3 [[PROTON]][c] '''+''' 1 [[GERANYLGERANYL-PP]][c] '''+''' 3 [[NADPH]][c] '''=>''' 3 [[NADP]][c] '''+''' 1 [[PHYTYL-PYROPHOSPHATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a polypeptide[c] '''+''' 1 H2O[c] '''=>''' 1 an L-amino acid[c] '''+''' 1 a polypeptide[c]
+
** 3 H+[c] '''+''' 1 geranylgeranyl diphosphate[c] '''+''' 3 NADPH[c] '''=>''' 3 NADP+[c] '''+''' 1 phytyl diphosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_860]]
+
* Gene: [[Tiso_gene_2613]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[annotation-experimental_annotation]]
−
* [[Tiso_gene_16906]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-athaliana]]
−
***AUTOMATED-NAME-MATCH
+
** Source: [[orthology-synechocystis]]
 +
** Source: [[orthology-esiliculosus]]
 +
** Source: [[orthology-creinhardtii]]
 
== Pathways  ==
 
== Pathways  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-athaliana]]
−
*** [[esiliculosus]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
** Source: [[orthology-creinhardtii]]
−
** [[pathwaytools]]:
+
*** Tool: [[pantograph]]
−
*** [[in-silico_annotation]]
+
** Source: [[orthology-synechocystis]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
+
* RHEA:
−
** [http://www.uniprot.org/uniprot/P15144 P15144]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26229 26229]
−
** [http://www.uniprot.org/uniprot/P15684 P15684]
+
* LIGAND-RXN:
−
** [http://www.uniprot.org/uniprot/P15145 P15145]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02063 R02063]
−
** [http://www.uniprot.org/uniprot/P04825 P04825]
+
−
** [http://www.uniprot.org/uniprot/P45274 P45274]
+
−
** [http://www.uniprot.org/uniprot/Q9JTU7 Q9JTU7]
+
−
** [http://www.uniprot.org/uniprot/Q10730 Q10730]
+
−
** [http://www.uniprot.org/uniprot/P15541 P15541]
+
−
** [http://www.uniprot.org/uniprot/P37897 P37897]
+
−
** [http://www.uniprot.org/uniprot/P37896 P37896]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=aminopeptidase_n}}
+
{{#set: common name=geranylgeranyl_diphosphate_reductase}}
−
{{#set: common name=membrane_aminopeptidase_i}}
+
{{#set: ec number=EC-1.3.1.83}}
−
{{#set: ec number=EC-3.4.11.2}}
+
{{#set: gene associated=Tiso_gene_2613}}
−
{{#set: gene associated=Tiso_gene_860|Tiso_gene_16906}}
+
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|orthology-creinhardtii}}
−
{{#set: reconstruction source=esiliculosus}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Latest revision as of 20:55, 21 March 2018

Reaction RXN-10625

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • geranylgeranyl_diphosphate_reductase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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