Difference between revisions of "RXN-17878"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_5715 == * left end position: ** 10289 * transcription direction: ** POSITIVE * right end position: ** 12421 * centisome position: ** 78.885...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17878 RXN-17878] == * direction: ** LEFT-TO-RIGHT * common name: ** methionine_aminopeptidase *...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17878 RXN-17878] == |
| − | * | + | * direction: |
| − | + | ** LEFT-TO-RIGHT | |
| − | + | * common name: | |
| − | ** | + | ** methionine_aminopeptidase |
| − | * | + | * ec number: |
| − | ** | + | ** [http://enzyme.expasy.org/EC/3.4.11.18 EC-3.4.11.18] |
| − | * | + | |
| − | ** | + | |
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * | + | * With identifiers: |
| − | ** | + | ** 1 [[L-methionyl-L-valyl-Protein]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[MET]][c] '''+''' 1 [[N-terminal-L-valine]][c] |
| − | + | * With common name(s): | |
| − | + | ** 1 an N-terminal-L-methionyl-L-valyl-[protein][c] '''+''' 1 H2O[c] '''=>''' 1 L-methionine[c] '''+''' 1 an N-terminal L-valyl-[protein][c] | |
| − | + | ||
| − | + | == Genes associated with this reaction == | |
| − | + | Genes have been associated with this reaction based on different elements listed below. | |
| − | * | + | * Gene: [[Tiso_gene_4247]] |
| − | ** | + | ** Source: [[annotation-in-silico_annotation]] |
| − | + | *** Assignment: AUTOMATED-NAME-MATCH | |
| − | + | * Gene: [[Tiso_gene_5715]] | |
| − | + | ** Source: [[annotation-in-silico_annotation]] | |
| − | + | *** Assignment: AUTOMATED-NAME-MATCH | |
| − | + | ** Source: [[annotation-experimental_annotation]] | |
| − | + | *** Assignment: AUTOMATED-NAME-MATCH | |
| − | + | == Pathways == | |
| − | * [[ | + | * [[PWY-7800]], Ac/N-end rule pathway: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7800 PWY-7800] |
| − | ** in-silico_annotation | + | ** '''21''' reactions found over '''21''' reactions in the full pathway |
| − | *** | + | == Reconstruction information == |
| − | + | * Category: [[annotation]] | |
| − | + | ** Source: [[annotation-experimental_annotation]] | |
| − | * [[ | + | *** Tool: [[pathwaytools]] |
| − | ** in-silico_annotation | + | ** Source: [[annotation-in-silico_annotation]] |
| − | *** | + | *** Tool: [[pathwaytools]] |
| − | ** experimental_annotation | + | |
| − | *** | + | |
| − | * [[ | + | |
| − | + | ||
| − | + | ||
| − | ** | + | |
| − | + | ||
| − | * [[ | + | |
| − | ** | + | |
| − | *** | + | |
| − | ** | + | |
| − | + | ||
| − | + | ||
| − | + | ||
| − | * [[ | + | |
== External links == | == External links == | ||
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: | + | {{#set: common name=methionine_aminopeptidase}} |
| − | {{#set: | + | {{#set: ec number=EC-3.4.11.18}} |
| − | {{#set: | + | {{#set: gene associated=Tiso_gene_4247|Tiso_gene_5715}} |
| − | {{#set: | + | {{#set: in pathway=PWY-7800}} |
| − | {{#set: | + | {{#set: reconstruction category=annotation}} |
| + | {{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}} | ||
| + | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 20:55, 21 March 2018
Contents
Reaction RXN-17878
- direction:
- LEFT-TO-RIGHT
- common name:
- methionine_aminopeptidase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 L-methionyl-L-valyl-Protein[c] + 1 WATER[c] => 1 MET[c] + 1 N-terminal-L-valine[c]
- With common name(s):
- 1 an N-terminal-L-methionyl-L-valyl-[protein][c] + 1 H2O[c] => 1 L-methionine[c] + 1 an N-terminal L-valyl-[protein][c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_4247
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_5715
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-experimental_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-in-silico_annotation
Pathways
Reconstruction information
- Category: annotation
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
