Difference between revisions of "RXN-7698"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THRESYN-RXN THRESYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** threonine_syntha...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7698 RXN-7698] == * direction: ** LEFT-TO-RIGHT * common name: ** chloroplast_beta-keto_acyl_re...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=THRESYN-RXN THRESYN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7698 RXN-7698] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** ORF
+
** chloroplast_beta-keto_acyl_reductase
−
** threonine_synthase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.2.3.1 EC-4.2.3.1]
+
** [http://enzyme.expasy.org/EC/1.1.1.330 EC-1.1.1.330]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[O-PHOSPHO-L-HOMOSERINE]][c] '''=>''' 1 [[THR]][c] '''+''' 1 [[Pi]][c]
+
** 1 [[Very-Long-Chain-oxoacyl-CoAs]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[Very-Long-Chain-3-Hydroxyacyl-CoAs]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 O-phospho-L-homoserine[c] '''=>''' 1 L-threonine[c] '''+''' 1 phosphate[c]
+
** 1 a very-long-chain oxoacyl-CoA[c] '''+''' 1 NADPH[c] '''+''' 1 H+[c] '''=>''' 1 NADP+[c] '''+''' 1 a very-long-chain (3R)-3-hydroxyacyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_2614]]
+
* Gene: [[Tiso_gene_9871]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_418]]
+
** Source: [[annotation-experimental_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** Assignment: EC-NUMBER
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_419]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_12871]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[synechocystis]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[HOMOSER-THRESYN-PWY]], L-threonine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HOMOSER-THRESYN-PWY HOMOSER-THRESYN-PWY]
+
* [[PWY-5080]], very long chain fatty acid biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5080 PWY-5080]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[creinhardtii]]
+
*** Tool: [[pathwaytools]]
−
*** [[synechocystis]]
+
** Source: [[annotation-experimental_annotation]]
−
*** [[esiliculosus]]
+
*** Tool: [[pathwaytools]]
−
*** [[athaliana]]
+
−
* [[manual]]:
+
−
** [[primary_network]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10840 10840]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22256 22256]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01466 R01466]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01779 R01779]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P04990 P04990]
+
** [http://www.uniprot.org/uniprot/Q9ZGI8 Q9ZGI8]
−
** [http://www.uniprot.org/uniprot/Q9Y9K2 Q9Y9K2]
+
** [http://www.uniprot.org/uniprot/Q9Z3Y5 Q9Z3Y5]
−
** [http://www.uniprot.org/uniprot/O28953 O28953]
+
** [http://www.uniprot.org/uniprot/P45375 P45375]
−
** [http://www.uniprot.org/uniprot/P66902 P66902]
+
** [http://www.uniprot.org/uniprot/P23238 P23238]
−
** [http://www.uniprot.org/uniprot/O59293 O59293]
+
** [http://www.uniprot.org/uniprot/P14697 P14697]
−
** [http://www.uniprot.org/uniprot/O66864 O66864]
+
** [http://www.uniprot.org/uniprot/P17611 P17611]
−
** [http://www.uniprot.org/uniprot/Q9PPA8 Q9PPA8]
+
−
** [http://www.uniprot.org/uniprot/O58587 O58587]
+
−
** [http://www.uniprot.org/uniprot/Q9V0P1 Q9V0P1]
+
−
** [http://www.uniprot.org/uniprot/Q9V190 Q9V190]
+
−
** [http://www.uniprot.org/uniprot/O26354 O26354]
+
−
** [http://www.uniprot.org/uniprot/O29700 O29700]
+
−
** [http://www.uniprot.org/uniprot/Q9WZ16 Q9WZ16]
+
−
** [http://www.uniprot.org/uniprot/Q9UZV8 Q9UZV8]
+
−
** [http://www.uniprot.org/uniprot/Q9JU91 Q9JU91]
+
−
** [http://www.uniprot.org/uniprot/Q9CDV8 Q9CDV8]
+
−
** [http://www.uniprot.org/uniprot/P44503 P44503]
+
−
** [http://www.uniprot.org/uniprot/Q58860 Q58860]
+
−
** [http://www.uniprot.org/uniprot/O66740 O66740]
+
−
** [http://www.uniprot.org/uniprot/O50114 O50114]
+
−
** [http://www.uniprot.org/uniprot/Q9YBW2 Q9YBW2]
+
−
** [http://www.uniprot.org/uniprot/P23669 P23669]
+
−
** [http://www.uniprot.org/uniprot/P27735 P27735]
+
−
** [http://www.uniprot.org/uniprot/Q00063 Q00063]
+
−
** [http://www.uniprot.org/uniprot/P74193 P74193]
+
−
** [http://www.uniprot.org/uniprot/P73711 P73711]
+
−
** [http://www.uniprot.org/uniprot/P16120 P16120]
+
−
** [http://www.uniprot.org/uniprot/P00934 P00934]
+
−
** [http://www.uniprot.org/uniprot/P29363 P29363]
+
−
** [http://www.uniprot.org/uniprot/Q9S7B5 Q9S7B5]
+
−
** [http://www.uniprot.org/uniprot/P45837 P45837]
+
−
** [http://www.uniprot.org/uniprot/Q42598 Q42598]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=ORF}}
+
{{#set: common name=chloroplast_beta-keto_acyl_reductase}}
−
{{#set: common name=threonine_synthase}}
+
{{#set: ec number=EC-1.1.1.330}}
−
{{#set: ec number=EC-4.2.3.1}}
+
{{#set: gene associated=Tiso_gene_9871}}
−
{{#set: gene associated=Tiso_gene_2614|Tiso_gene_418|Tiso_gene_419|Tiso_gene_12871}}
+
{{#set: in pathway=PWY-5080}}
−
{{#set: in pathway=HOMOSER-THRESYN-PWY}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=creinhardtii|synechocystis|esiliculosus|athaliana}}
+
−
{{#set: reconstruction category=manual}}
+
−
{{#set: reconstruction source=primary_network}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
 

Latest revision as of 19:56, 21 March 2018

Reaction RXN-7698

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • chloroplast_beta-keto_acyl_reductase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5080, very long chain fatty acid biosynthesis I: PWY-5080
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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