Difference between revisions of "THRESYN-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_6065 == * left end position: ** 5830 * transcription direction: ** POSITIVE * right end position: ** 8254 * centisome position: ** 46.24048...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THRESYN-RXN THRESYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** threonine_syntha...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_6065 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=THRESYN-RXN THRESYN-RXN] ==
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* left end position:
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* direction:
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** 5830
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** ORF
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* right end position:
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** threonine_synthase
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** 8254
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/4.2.3.1 EC-4.2.3.1]
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** 46.240482   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[ASPARAGINE--TRNA-LIGASE-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[WATER]][c] '''+''' 1 [[O-PHOSPHO-L-HOMOSERINE]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[THR]][c]
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***ec-number
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* With common name(s):
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** experimental_annotation
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** 1 H2O[c] '''+''' 1 O-phospho-L-homoserine[c] '''=>''' 1 phosphate[c] '''+''' 1 L-threonine[c]
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***ec-number
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== Pathways associated ==
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== Genes associated with this reaction  ==
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* [[TRNA-CHARGING-PWY]]
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_419]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_12871]]
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-synechocystis]]
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** Source: [[orthology-creinhardtii]]
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* Gene: [[Tiso_gene_2614]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_418]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways ==
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* [[HOMOSER-THRESYN-PWY]], L-threonine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HOMOSER-THRESYN-PWY HOMOSER-THRESYN-PWY]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=5830}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10840 10840]
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{{#set: right end position=8254}}
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* LIGAND-RXN:
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{{#set: centisome position=46.240482    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R01466 R01466]
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{{#set: reaction associated=ASPARAGINE--TRNA-LIGASE-RXN}}
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* UNIPROT:
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{{#set: pathway associated=TRNA-CHARGING-PWY}}
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** [http://www.uniprot.org/uniprot/P04990 P04990]
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** [http://www.uniprot.org/uniprot/Q9Y9K2 Q9Y9K2]
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** [http://www.uniprot.org/uniprot/O28953 O28953]
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** [http://www.uniprot.org/uniprot/P66902 P66902]
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** [http://www.uniprot.org/uniprot/O59293 O59293]
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** [http://www.uniprot.org/uniprot/O66864 O66864]
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** [http://www.uniprot.org/uniprot/Q9PPA8 Q9PPA8]
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** [http://www.uniprot.org/uniprot/O58587 O58587]
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** [http://www.uniprot.org/uniprot/Q9V0P1 Q9V0P1]
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** [http://www.uniprot.org/uniprot/Q9V190 Q9V190]
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** [http://www.uniprot.org/uniprot/O26354 O26354]
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** [http://www.uniprot.org/uniprot/O29700 O29700]
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** [http://www.uniprot.org/uniprot/Q9WZ16 Q9WZ16]
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** [http://www.uniprot.org/uniprot/Q9UZV8 Q9UZV8]
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** [http://www.uniprot.org/uniprot/Q9JU91 Q9JU91]
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** [http://www.uniprot.org/uniprot/Q9CDV8 Q9CDV8]
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** [http://www.uniprot.org/uniprot/P44503 P44503]
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** [http://www.uniprot.org/uniprot/Q58860 Q58860]
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** [http://www.uniprot.org/uniprot/O66740 O66740]
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** [http://www.uniprot.org/uniprot/O50114 O50114]
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** [http://www.uniprot.org/uniprot/Q9YBW2 Q9YBW2]
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** [http://www.uniprot.org/uniprot/P23669 P23669]
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** [http://www.uniprot.org/uniprot/P27735 P27735]
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** [http://www.uniprot.org/uniprot/Q00063 Q00063]
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** [http://www.uniprot.org/uniprot/P74193 P74193]
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** [http://www.uniprot.org/uniprot/P73711 P73711]
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** [http://www.uniprot.org/uniprot/P16120 P16120]
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** [http://www.uniprot.org/uniprot/P00934 P00934]
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** [http://www.uniprot.org/uniprot/P29363 P29363]
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** [http://www.uniprot.org/uniprot/Q9S7B5 Q9S7B5]
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** [http://www.uniprot.org/uniprot/P45837 P45837]
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** [http://www.uniprot.org/uniprot/Q42598 Q42598]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=ORF}}
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{{#set: common name=threonine_synthase}}
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{{#set: ec number=EC-4.2.3.1}}
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{{#set: gene associated=Tiso_gene_419|Tiso_gene_12871|Tiso_gene_2614|Tiso_gene_418}}
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{{#set: in pathway=HOMOSER-THRESYN-PWY}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:56, 21 March 2018

Reaction THRESYN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
    • threonine_synthase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 O-phospho-L-homoserine[c] => 1 phosphate[c] + 1 L-threonine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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