Difference between revisions of "3.1.1.64-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-12173 CPD-12173] == * smiles: ** CC(C(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.1.64-RXN 3.1.1.64-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** all-trans-retinyl-pal...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-12173 CPD-12173] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.1.64-RXN 3.1.1.64-RXN] ==
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* smiles:
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* direction:
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** CC(C(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])CO
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** LEFT-TO-RIGHT
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* inchi key:
+
−
** InChIKey=WWEOGFZEFHPUAM-UQCJFRAESA-J
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* common name:
 
* common name:
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** (S)-3-hydroxy-isobutanoyl-CoA
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** all-trans-retinyl-palmitate hydrolase
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* molecular weight:
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** ORF
−
** 849.593   
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** alpha_beta_hydrolase_fold_protein
 +
** alpha_beta_hydrolase
 +
** serine_esterase
 +
** sialate_o-acetylesterase-like_protein
 +
** lysophospholipase
 +
** protein_chloroplastic
 +
** para-nitrobenzyl_esterase
 +
* ec number:
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** [http://enzyme.expasy.org/EC/3.1.1.1 EC-3.1.1.1]
 
* Synonym(s):
 
* Synonym(s):
−
** (S)-3-hydroxy-2-methylpropanoyl-CoA
 
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** (S)-3-hydroxy-isobutyryl-coenzyme A
 
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** (S)-3-Hydroxy-2-methylpropionyl-CoA
 
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** (S)-β-hydroxy-isobutyryl-CoA
 
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** (S)-3-hydroxy-isobutyryl-CoA
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[WATER]][c] '''+''' 1 [[CHOCOLA_A]][c] '''=>''' 1 [[PALMITATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-13524]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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* [[METHYLACYLYLCOA-HYDROXY-RXN]]
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** 1 H2O[c] '''+''' 1 all-trans-retinyl palmitate[c] '''=>''' 1 palmitate[c] '''+''' 1 H+[c] '''+''' 1 all-trans-retinol[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_1537]]
 +
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_4650]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_12686]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_10066]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_17029]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_11351]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_1538]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_19778]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_16518]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_4606]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_1922]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_2556]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_9429]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways  ==
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* PUBCHEM:
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* RHEA:
−
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=46173510 46173510]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13933 13933]
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* CHEBI:
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* LIGAND-RXN:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=62611 62611]
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** [http://www.genome.jp/dbget-bin/www_bget?R02368 R02368]
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* METABOLIGHTS : MTBLC28259
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{{#set: direction=LEFT-TO-RIGHT}}
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* LIGAND-CPD:
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{{#set: common name=all-trans-retinyl-palmitate hydrolase}}
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** [http://www.genome.jp/dbget-bin/www_bget?C06000 C06000]
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{{#set: common name=ORF}}
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{{#set: smiles=CC(C(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])CO}}
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{{#set: common name=alpha_beta_hydrolase_fold_protein}}
−
{{#set: inchi key=InChIKey=WWEOGFZEFHPUAM-UQCJFRAESA-J}}
+
{{#set: common name=alpha_beta_hydrolase}}
−
{{#set: common name=(S)-3-hydroxy-isobutanoyl-CoA}}
+
{{#set: common name=serine_esterase}}
−
{{#set: molecular weight=849.593    }}
+
{{#set: common name=sialate_o-acetylesterase-like_protein}}
−
{{#set: common name=(S)-3-hydroxy-2-methylpropanoyl-CoA|(S)-3-hydroxy-isobutyryl-coenzyme A|(S)-3-Hydroxy-2-methylpropionyl-CoA|(S)-β-hydroxy-isobutyryl-CoA|(S)-3-hydroxy-isobutyryl-CoA}}
+
{{#set: common name=lysophospholipase}}
−
{{#set: consumed by=3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN}}
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{{#set: common name=protein_chloroplastic}}
−
{{#set: consumed or produced by=METHYLACYLYLCOA-HYDROXY-RXN}}
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{{#set: common name=para-nitrobenzyl_esterase}}
 +
{{#set: ec number=EC-3.1.1.1}}
 +
{{#set: gene associated=Tiso_gene_1537|Tiso_gene_4650|Tiso_gene_12686|Tiso_gene_10066|Tiso_gene_17029|Tiso_gene_11351|Tiso_gene_1538|Tiso_gene_19778|Tiso_gene_16518|Tiso_gene_4606|Tiso_gene_1922|Tiso_gene_2556|Tiso_gene_9429}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:58, 21 March 2018

Reaction 3.1.1.64-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • all-trans-retinyl-palmitate hydrolase
    • ORF
    • alpha_beta_hydrolase_fold_protein
    • alpha_beta_hydrolase
    • serine_esterase
    • sialate_o-acetylesterase-like_protein
    • lysophospholipase
    • protein_chloroplastic
    • para-nitrobenzyl_esterase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 all-trans-retinyl palmitate[c] => 1 palmitate[c] + 1 H+[c] + 1 all-trans-retinol[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links









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