Difference between revisions of "Tiso gene 1007"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-160 RXN1F-160] == * direction: ** LEFT-TO-RIGHT * common name: ** ent-7α-hydroxykaur-16...")
(Created page with "Category:Gene == Gene Tiso_gene_1007 == * right end position: ** 6190 * transcription direction: ** POSITIVE * left end position: ** 3470 * centisome position: ** 11.50912...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-160 RXN1F-160] ==
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== Gene Tiso_gene_1007 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 6190
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* common name:
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* transcription direction:
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** ent-7α-hydroxykaur-16-en-19-oate monooxygenase
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** POSITIVE
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* left end position:
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** 3470
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* centisome position:
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** 11.509120   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PRPPAMIDOTRANS-RXN]]
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** 1 [[CPD1F-136]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 2 [[WATER]][c] '''+''' 1 [[CPD1F-138]][c] '''+''' 1 [[NADP]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 ent-7α-hydroxykaur-16-en-19-oate[c] '''+''' 1 oxygen[c] '''+''' 1 NADPH[c] '''+''' 1 H+[c] '''=>''' 2 H2O[c] '''+''' 1 gibberellin A12-aldehyde[c] '''+''' 1 NADP+[c]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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== Genes associated with this reaction  ==
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== Pathways associated ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-6121]]
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* [[Tiso_gene_3577]]
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* [[PWY-6122]]
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** [[pantograph]]-[[esiliculosus]]
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* [[PWY-7282]]
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* [[Tiso_gene_8263]]
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* [[PWY-6277]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways ==
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* [[PWY-5047]], gibberellin biosynthesis IV (Gibberella fujikuroi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5047 PWY-5047]
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** '''6''' reactions found over '''15''' reactions in the full pathway
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* [[PWY-5034]], GA12 biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5034 PWY-5034]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=6190}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22904 22904]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=3470}}
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** [http://www.genome.jp/dbget-bin/www_bget?R06295 R06295]
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{{#set: centisome position=11.509120    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=PRPPAMIDOTRANS-RXN}}
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{{#set: common name=ent-7α-hydroxykaur-16-en-19-oate monooxygenase}}
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{{#set: pathway associated=PWY-6121|PWY-6122|PWY-7282|PWY-6277}}
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{{#set: gene associated=Tiso_gene_3577|Tiso_gene_8263}}
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{{#set: in pathway=PWY-5047|PWY-5034}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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Latest revision as of 19:58, 21 March 2018

Gene Tiso_gene_1007

  • right end position:
    • 6190
  • transcription direction:
    • POSITIVE
  • left end position:
    • 3470
  • centisome position:
    • 11.509120
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_1007&oldid=45008"