Difference between revisions of "Tiso gene 2365"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15123 RXN-15123] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Gene == Gene Tiso_gene_2365 == * right end position: ** 10419 * transcription direction: ** NEGATIVE * left end position: ** 6551 * centisome position: ** 33.2116...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15123 RXN-15123] ==
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== Gene Tiso_gene_2365 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 10419
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/3.5.99 EC-3.5.99]
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** NEGATIVE
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* left end position:
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** 6551
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* centisome position:
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** 33.211662   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3PGAREARR-RXN]]
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** 1 [[CPD-16013]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[2-OXOBUTANOATE]][c] '''+''' 1 [[AMMONIUM]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 2-iminobutanoate[c] '''+''' 1 H+[c] '''+''' 1 H2O[c] '''=>''' 1 2-oxobutanoate[c] '''+''' 1 ammonium[c]
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* Reaction: [[RXN-15509]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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== Pathways  ==
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* Reaction: [[RXN-15510]]
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* [[HOMOCYSDEGR-PWY]], L-cysteine biosynthesis III (from L-homocysteine): [http://metacyc.org/META/NEW-IMAGE?object=HOMOCYSDEGR-PWY HOMOCYSDEGR-PWY]
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** Source: [[annotation-in-silico_annotation]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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*** Assignment: ec-number
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* [[ILEUSYN-PWY]], L-isoleucine biosynthesis I (from threonine): [http://metacyc.org/META/NEW-IMAGE?object=ILEUSYN-PWY ILEUSYN-PWY]
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* Reaction: [[RXN-15511]]
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** '''7''' reactions found over '''7''' reactions in the full pathway
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-701]], L-methionine degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-701 PWY-701]
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*** Assignment: ec-number
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* Reaction: [[RXN-15512]]
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* [[PWY-5437]], L-threonine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5437 PWY-5437]
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** Source: [[annotation-in-silico_annotation]]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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*** Assignment: ec-number
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* [[PWY-5826]], hypoglycin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5826 PWY-5826]
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* Reaction: [[RXN-15513]]
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** '''4''' reactions found over '''14''' reactions in the full pathway
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** Source: [[annotation-in-silico_annotation]]
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== Reconstruction information  ==
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*** Assignment: ec-number
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* [[annotation]]:
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== Pathways associated ==
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** [[pathwaytools]]:
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* [[PWY-1042]]
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*** [[experimental_annotation]]
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* [[P341-PWY]]
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*** [[in-silico_annotation]]
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* [[PWY-2221]]
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* [[PWY-1622]]
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* [[GLUCONEO-PWY]]
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* [[GLYCOLYSIS]]
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* [[PWY-6901]]
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* [[ANAGLYCOLYSIS-PWY]]
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* [[PWY-7218]]
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* [[PWY-6405]]
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* [[P124-PWY]]
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* [[PWY-6886]]
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* [[PWY66-399]]
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* [[PWY-5723]]
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* [[PWY-6142]]
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* [[PWY-5484]]
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* [[PWY-7124]]
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* [[P122-PWY]]
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* [[PWY-7003]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=10419}}
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{{#set: ec number=EC-3.5.99}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: in pathway=HOMOCYSDEGR-PWY|ILEUSYN-PWY|PWY-701|PWY-5437|PWY-5826}}
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{{#set: left end position=6551}}
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{{#set: reconstruction category=annotation}}
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{{#set: centisome position=33.211662    }}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reaction associated=3PGAREARR-RXN|RXN-15509|RXN-15510|RXN-15511|RXN-15512|RXN-15513}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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{{#set: pathway associated=PWY-1042|P341-PWY|PWY-2221|PWY-1622|GLUCONEO-PWY|GLYCOLYSIS|PWY-6901|ANAGLYCOLYSIS-PWY|PWY-7218|PWY-6405|P124-PWY|PWY-6886|PWY66-399|PWY-5723|PWY-6142|PWY-5484|PWY-7124|P122-PWY|PWY-7003}}

Latest revision as of 20:59, 21 March 2018

Gene Tiso_gene_2365

  • right end position:
    • 10419
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 6551
  • centisome position:
    • 33.211662
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_2365&oldid=45060"