Difference between revisions of "PROLINE-RACEMASE-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-10269 CPD-10269] == * smiles: ** CCCCCCC=CCCCCCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(O...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PROLINE-RACEMASE-RXN PROLINE-RACEMASE-RXN] == * direction: ** REVERSIBLE * common name: ** proline_...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-10269 CPD-10269] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PROLINE-RACEMASE-RXN PROLINE-RACEMASE-RXN] ==
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* smiles:
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* direction:
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** CCCCCCC=CCCCCCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
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** REVERSIBLE
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* inchi key:
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** InChIKey=QBYOCCWNZAOZTL-MDMKAECGSA-J
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* common name:
 
* common name:
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** palmitoleoyl-CoA
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** proline_racemase
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* molecular weight:
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* ec number:
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** 999.899   
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** [http://enzyme.expasy.org/EC/5.1.1.4 EC-5.1.1.4]
 
* Synonym(s):
 
* Synonym(s):
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** 16:1-delta9-CoA
 
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** 9z-hexadecenoyl-CoA
 
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** cis-9-hexadecenoyl-CoA
 
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** palmitoleoyl coenzyme A
 
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** (9Z)-hexadec-9-enoyl-CoA
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-17019]]
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* With identifiers:
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* [[RXN-17008]]
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** 1 [[PRO]][c] '''<=>''' 1 [[D-PROLINE]][c]
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* [[RXN-17009]]
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* With common name(s):
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* [[RXN-17788]]
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** 1 L-proline[c] '''<=>''' 1 D-proline[c]
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== Reaction(s) known to produce the compound ==
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* [[RXN-17787]]
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== Genes associated with this reaction  ==
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* [[RXN0-7248]]
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Genes have been associated with this reaction based on different elements listed below.
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== Reaction(s) of unknown directionality ==
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* Gene: [[Tiso_gene_13061]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-6344]], L-ornithine degradation II (Stickland reaction): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6344 PWY-6344]
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** '''4''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25244393 25244393]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10680 10680]
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* CHEBI:
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* LIGAND-RXN:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=61540 61540]
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** [http://www.genome.jp/dbget-bin/www_bget?R01255 R01255]
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* METABOLIGHTS : MTBLC61540
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{{#set: direction=REVERSIBLE}}
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{{#set: smiles=CCCCCCC=CCCCCCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]}}
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{{#set: common name=proline_racemase}}
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{{#set: inchi key=InChIKey=QBYOCCWNZAOZTL-MDMKAECGSA-J}}
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{{#set: ec number=EC-5.1.1.4}}
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{{#set: common name=palmitoleoyl-CoA}}
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{{#set: gene associated=Tiso_gene_13061}}
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{{#set: molecular weight=999.899    }}
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{{#set: in pathway=PWY-6344}}
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{{#set: common name=16:1-delta9-CoA|9z-hexadecenoyl-CoA|cis-9-hexadecenoyl-CoA|palmitoleoyl coenzyme A|(9Z)-hexadec-9-enoyl-CoA}}
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{{#set: reconstruction category=annotation}}
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{{#set: consumed by=RXN-17019|RXN-17008|RXN-17009|RXN-17788}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: produced by=RXN-17787|RXN0-7248}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:00, 21 March 2018

Reaction PROLINE-RACEMASE-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • proline_racemase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-proline[c] <=> 1 D-proline[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6344, L-ornithine degradation II (Stickland reaction): PWY-6344
    • 4 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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