Difference between revisions of "Tiso gene 17967"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=H2PTEROATESYNTH-RXN H2PTEROATESYNTH-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** folic_a...")
(Created page with "Category:Gene == Gene Tiso_gene_17967 == * right end position: ** 2220 * transcription direction: ** POSITIVE * left end position: ** 159 * centisome position: ** 4.753363...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=H2PTEROATESYNTH-RXN H2PTEROATESYNTH-RXN] ==
+
== Gene Tiso_gene_17967 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 2220
−
* common name:
+
* transcription direction:
−
** folic_acid_synthesis_protein
+
** POSITIVE
−
* ec number:
+
* left end position:
−
** [http://enzyme.expasy.org/EC/2.5.1.15 EC-2.5.1.15]
+
** 159
 +
* centisome position:
 +
** 4.753363   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[ACOA120or]]
−
** 1 [[P-AMINO-BENZOATE]][c] '''+''' 1 [[DIHYDROPTERIN-CH2OH-PP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[7-8-DIHYDROPTEROATE]][c]
+
** Source: [[orthology-creinhardtii]]
−
* With common name(s):
+
* Reaction: [[ACOA140or]]
−
** 1 4-aminobenzoate[c] '''+''' 1 (7,8-dihydropterin-6-yl)methyl diphosphate[c] '''=>''' 1 diphosphate[c] '''+''' 1 7,8-dihydropteroate[c]
+
** Source: [[orthology-creinhardtii]]
−
 
+
* Reaction: [[ACOA160or]]
−
== Genes associated with this reaction  ==
+
** Source: [[orthology-creinhardtii]]
−
Genes have been associated with this reaction based on different elements listed below.
+
* Reaction: [[ACOA40or]]
−
* [[Tiso_gene_11659]]
+
** Source: [[orthology-creinhardtii]]
−
** IN-SILICO_ANNOTATION
+
* Reaction: [[ACOA80or]]
−
***EC-NUMBER
+
** Source: [[orthology-creinhardtii]]
−
** [[pantograph]]-[[athaliana]]
+
* Reaction: [[LONG-CHAIN-ACYL-COA-DEHYDROGENASE-RXN]]
−
** [[pantograph]]-[[synechocystis]]
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** Assignment: ec-number
−
** [[pantograph]]-[[creinhardtii]]
+
* Reaction: [[PPCOAOm]]
−
== Pathways  ==
+
** Source: [[orthology-creinhardtii]]
−
* [[PWY-6614]], tetrahydrofolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6614 PWY-6614]
+
* Reaction: [[RXN-11734]]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** Source: [[annotation-in-silico_annotation]]
−
== Reconstruction information  ==
+
*** Assignment: ec-number
−
* [[orthology]]:
+
* Reaction: [[RXN-13451]]
−
** [[pantograph]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[creinhardtii]]
+
*** Assignment: ec-number
−
*** [[synechocystis]]
+
* Reaction: [[RXN-13615]]
−
*** [[athaliana]]
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[esiliculosus]]
+
*** Assignment: ec-number
−
* [[annotation]]:
+
* Reaction: [[RXN-14131]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[in-silico_annotation]]
+
*** Assignment: ec-number
 +
* Reaction: [[RXN-14229]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-14262]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-14278]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-16540]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-16557]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
== Pathways associated ==
 +
* [[PWY-7094]]
 +
* [[PWY-7654]]
 +
* [[PWY-7656]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: right end position=2220}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19949 19949]
+
{{#set: transcription direction=POSITIVE}}
−
* LIGAND-RXN:
+
{{#set: left end position=159}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R03067 R03067]
+
{{#set: centisome position=4.753363    }}
−
* UNIPROT:
+
{{#set: reaction associated=ACOA120or|ACOA140or|ACOA160or|ACOA40or|ACOA80or|LONG-CHAIN-ACYL-COA-DEHYDROGENASE-RXN|PPCOAOm|RXN-11734|RXN-13451|RXN-13615|RXN-14131|RXN-14229|RXN-14262|RXN-14278|RXN-16540|RXN-16557}}
−
** [http://www.uniprot.org/uniprot/P0AC11 P0AC11]
+
{{#set: pathway associated=PWY-7094|PWY-7654|PWY-7656}}
−
** [http://www.uniprot.org/uniprot/P0AC13 P0AC13]
+
−
** [http://www.uniprot.org/uniprot/Q05851 Q05851]
+
−
** [http://www.uniprot.org/uniprot/Q25704 Q25704]
+
−
** [http://www.uniprot.org/uniprot/P0A578 P0A578]
+
−
** [http://www.uniprot.org/uniprot/O84619 O84619]
+
−
** [http://www.uniprot.org/uniprot/P0C003 P0C003]
+
−
** [http://www.uniprot.org/uniprot/Q9ZJZ4 Q9ZJZ4]
+
−
** [http://www.uniprot.org/uniprot/Q9CGE2 Q9CGE2]
+
−
** [http://www.uniprot.org/uniprot/Q9JT70 Q9JT70]
+
−
** [http://www.uniprot.org/uniprot/P43776 P43776]
+
−
** [http://www.uniprot.org/uniprot/P64139 P64139]
+
−
** [http://www.uniprot.org/uniprot/Q9WXP7 Q9WXP7]
+
−
** [http://www.uniprot.org/uniprot/O67448 O67448]
+
−
** [http://www.uniprot.org/uniprot/P28822 P28822]
+
−
** [http://www.uniprot.org/uniprot/Q9Z7E8 Q9Z7E8]
+
−
** [http://www.uniprot.org/uniprot/P82602 P82602]
+
−
** [http://www.uniprot.org/uniprot/O25830 O25830]
+
−
** [http://www.uniprot.org/uniprot/Q9RXY6 Q9RXY6]
+
−
** [http://www.uniprot.org/uniprot/Q9PHT1 Q9PHT1]
+
−
** [http://www.uniprot.org/uniprot/Q52352 Q52352]
+
−
** [http://www.uniprot.org/uniprot/Q49184 Q49184]
+
−
** [http://www.uniprot.org/uniprot/Q51161 Q51161]
+
−
** [http://www.uniprot.org/uniprot/P73248 P73248]
+
−
** [http://www.uniprot.org/uniprot/P0C002 P0C002]
+
−
** [http://www.uniprot.org/uniprot/O04862 O04862]
+
−
** [http://www.uniprot.org/uniprot/Q9SZV3 Q9SZV3]
+
−
** [http://www.uniprot.org/uniprot/Q9X8H8 Q9X8H8]
+
−
** [http://www.uniprot.org/uniprot/O75013 O75013]
+
−
** [http://www.uniprot.org/uniprot/P0C0X2 P0C0X2]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=folic_acid_synthesis_protein}}
+
−
{{#set: ec number=EC-2.5.1.15}}
+
−
{{#set: gene associated=Tiso_gene_11659}}
+
−
{{#set: in pathway=PWY-6614}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=creinhardtii|synechocystis|athaliana|esiliculosus}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Latest revision as of 21:01, 21 March 2018

Gene Tiso_gene_17967

  • right end position:
    • 2220
  • transcription direction:
    • POSITIVE
  • left end position:
    • 159
  • centisome position:
    • 4.753363
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_17967&oldid=45245"