Difference between revisions of "RIBOFLAVINKIN-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_19578 == * left end position: ** 366 * transcription direction: ** NEGATIVE * right end position: ** 1422 * centisome position: ** 16.54611...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBOFLAVINKIN-RXN RIBOFLAVINKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** riboflavin_...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_19578 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBOFLAVINKIN-RXN RIBOFLAVINKIN-RXN] ==
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* left end position:
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* direction:
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** 366
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** riboflavin_kinase
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* right end position:
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* ec number:
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** 1422
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** [http://enzyme.expasy.org/EC/2.7.1.26 EC-2.7.1.26]
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* centisome position:
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** 16.546112   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[1.8.4.12-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[ATP]][c] '''+''' 1 [[RIBOFLAVIN]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[FMN]][c] '''+''' 1 [[PROTON]][c]
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***ec-number
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* With common name(s):
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** [[pantograph]]-[[esiliculosus]]
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** 1 ATP[c] '''+''' 1 riboflavin[c] '''=>''' 1 ADP[c] '''+''' 1 FMN[c] '''+''' 1 H+[c]
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* [[1.8.4.14-RXN]]
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** in-silico_annotation
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== Genes associated with this reaction  ==
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***automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
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* Gene: [[Tiso_gene_7479]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-synechocystis]]
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* Gene: [[Tiso_gene_16837]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_1086]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-synechocystis]]
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== Pathways ==
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* [[PWY66-366]], flavin biosynthesis IV (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-366 PWY66-366]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-6168]], flavin biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6168 PWY-6168]
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** '''6''' reactions found over '''9''' reactions in the full pathway
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* [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-5523]], 5,6-dimethylbenzimidazole biosynthesis I (aerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5523 PWY-5523]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=366}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14357 14357]
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{{#set: right end position=1422}}
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* LIGAND-RXN:
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{{#set: centisome position=16.546112    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R00549 R00549]
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{{#set: reaction associated=1.8.4.12-RXN|1.8.4.14-RXN}}
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/Q9JVY5 Q9JVY5]
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** [http://www.uniprot.org/uniprot/Q9PHS7 Q9PHS7]
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** [http://www.uniprot.org/uniprot/Q59263 Q59263]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=riboflavin_kinase}}
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{{#set: ec number=EC-2.7.1.26}}
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{{#set: gene associated=Tiso_gene_7479|Tiso_gene_16837|Tiso_gene_1086}}
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{{#set: in pathway=PWY66-366|PWY-6168|RIBOSYN2-PWY|PWY-5523}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|orthology-synechocystis|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 21:02, 21 March 2018

Reaction RIBOFLAVINKIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • riboflavin_kinase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 riboflavin[c] => 1 ADP[c] + 1 FMN[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY66-366, flavin biosynthesis IV (mammalian): PWY66-366
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6168, flavin biosynthesis III (fungi): PWY-6168
    • 6 reactions found over 9 reactions in the full pathway
  • RIBOSYN2-PWY, flavin biosynthesis I (bacteria and plants): RIBOSYN2-PWY
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-5523, 5,6-dimethylbenzimidazole biosynthesis I (aerobic): PWY-5523
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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