Difference between revisions of "ACETATE--COA-LIGASE-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=4-IMIDAZOLEACETATE 4-IMIDAZOLEACETATE] == * smiles: ** C1(NC=C(CC(=O)[O-])N=1) * inchi key: **...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETATE--COA-LIGASE-RXN ACETATE--COA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: **...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=4-IMIDAZOLEACETATE 4-IMIDAZOLEACETATE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETATE--COA-LIGASE-RXN ACETATE--COA-LIGASE-RXN] ==
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* smiles:
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* direction:
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** C1(NC=C(CC(=O)[O-])N=1)
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=PRJKNHOMHKJCEJ-UHFFFAOYSA-M
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* common name:
 
* common name:
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** 4-imidazoleacetate
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** acetyl-coenzyme_a_synthetase
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* molecular weight:
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* ec number:
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** 125.107   
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** [http://enzyme.expasy.org/EC/6.2.1.1 EC-6.2.1.1]
 
* Synonym(s):
 
* Synonym(s):
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** imidazole-4-acetate
 
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** imidazoleacetic acid
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[ALDH_im4ac]]
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** 1 [[CO-A]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[ACET]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c]
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* [[RXN-10089]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 coenzyme A[c] '''+''' 1 ATP[c] '''+''' 1 acetate[c] '''=>''' 1 acetyl-CoA[c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_3617]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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** Source: [[orthology-creinhardtii]]
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* Gene: [[Tiso_gene_1612]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-synechocystis]]
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** Source: [[orthology-esiliculosus]]
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** Source: [[orthology-creinhardtii]]
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* Gene: [[Tiso_gene_3616]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY66-161]], ethanol degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-161 PWY66-161]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY66-21]], ethanol degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-21 PWY66-21]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY66-162]], ethanol degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-162 PWY66-162]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY0-1313]], acetate conversion to acetyl-CoA: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1313 PWY0-1313]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[PWY-6672]], cis-genanyl-CoA degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6672 PWY-6672]
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** '''4''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7118]], chitin degradation to ethanol: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7118 PWY-7118]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=4139109 4139109]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23176 23176]
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* HMDB : HMDB02024
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* LIGAND-RXN:
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* LIGAND-CPD:
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** [http://www.genome.jp/dbget-bin/www_bget?R00235 R00235]
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** [http://www.genome.jp/dbget-bin/www_bget?C02835 C02835]
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* UNIPROT:
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/P27095 P27095]
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** [http://www.chemspider.com/Chemical-Structure.3351679.html 3351679]
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** [http://www.uniprot.org/uniprot/P31638 P31638]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/Q12662 Q12662]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57969 57969]
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** [http://www.uniprot.org/uniprot/P28812 P28812]
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* METABOLIGHTS : MTBLC57969
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** [http://www.uniprot.org/uniprot/P27550 P27550]
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{{#set: smiles=C1(NC=C(CC(=O)[O-])N=1)}}
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** [http://www.uniprot.org/uniprot/O34613 O34613]
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{{#set: inchi key=InChIKey=PRJKNHOMHKJCEJ-UHFFFAOYSA-M}}
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** [http://www.uniprot.org/uniprot/Q9PMD2 Q9PMD2]
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{{#set: common name=4-imidazoleacetate}}
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** [http://www.uniprot.org/uniprot/P36333 P36333]
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{{#set: molecular weight=125.107    }}
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** [http://www.uniprot.org/uniprot/Q01574 Q01574]
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{{#set: common name=imidazole-4-acetate|imidazoleacetic acid}}
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** [http://www.uniprot.org/uniprot/P39062 P39062]
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{{#set: produced by=ALDH_im4ac|RXN-10089}}
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** [http://www.uniprot.org/uniprot/Q01576 Q01576]
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** [http://www.uniprot.org/uniprot/P52910 P52910]
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** [http://www.uniprot.org/uniprot/Q55404 Q55404]
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** [http://www.uniprot.org/uniprot/P16928 P16928]
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** [http://www.uniprot.org/uniprot/P16929 P16929]
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** [http://www.uniprot.org/uniprot/O68040 O68040]
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** [http://www.uniprot.org/uniprot/P78773 P78773]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=acetyl-coenzyme_a_synthetase}}
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{{#set: ec number=EC-6.2.1.1}}
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{{#set: gene associated=Tiso_gene_3617|Tiso_gene_1612|Tiso_gene_3616}}
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{{#set: in pathway=PWY66-161|PWY66-21|PWY66-162|PWY0-1313|PWY-6672|PWY-7118}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:19, 21 March 2018

Reaction ACETATE--COA-LIGASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • acetyl-coenzyme_a_synthetase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 coenzyme A[c] + 1 ATP[c] + 1 acetate[c] => 1 acetyl-CoA[c] + 1 AMP[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY66-161, ethanol degradation III: PWY66-161
    • 2 reactions found over 3 reactions in the full pathway
  • PWY66-21, ethanol degradation II: PWY66-21
    • 3 reactions found over 3 reactions in the full pathway
  • PWY66-162, ethanol degradation IV: PWY66-162
    • 2 reactions found over 3 reactions in the full pathway
  • PWY0-1313, acetate conversion to acetyl-CoA: PWY0-1313
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-6672, cis-genanyl-CoA degradation: PWY-6672
    • 4 reactions found over 9 reactions in the full pathway
  • PWY-7118, chitin degradation to ethanol: PWY-7118
    • 4 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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