Difference between revisions of "Tiso gene 4726"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-1437 RXN1G-1437] == * direction: ** LEFT-TO-RIGHT * common name: ** trehalose-phosphatase * e...")
(Created page with "Category:Gene == Gene Tiso_gene_4726 == * right end position: ** 7164 * transcription direction: ** NEGATIVE * left end position: ** 3337 * centisome position: ** 23.172...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-1437 RXN1G-1437] ==
+
== Gene Tiso_gene_4726 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 7164
−
* common name:
+
* transcription direction:
−
** trehalose-phosphatase
+
** NEGATIVE
−
* ec number:
+
* left end position:
−
** [http://enzyme.expasy.org/EC/3.1.3.12 EC-3.1.3.12]
+
** 3337
 +
* centisome position:
 +
** 23.172   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[ATPASE-RXN]]
−
** 1 [[WATER]][c] '''+''' 1 [[CPD1G-772]][c] '''=>''' 1 [[CPD1G-1346]][c] '''+''' 1 [[Pi]][c]
+
** Source: [[annotation-in-silico_annotation]]
−
* With common name(s):
+
*** Assignment: ec-number
−
** 1 H2O[c] '''+''' 1 6-O-trans-methoxy-mycolyl-trehalose 6-phosphate[c] '''=>''' 1 trehalose-trans-methoxy-mono-mycolate[c] '''+''' 1 phosphate[c]
+
* Reaction: [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
−
 
+
** Source: [[annotation-in-silico_annotation]]
−
== Genes associated with this reaction  ==
+
*** Assignment: ec-number
−
Genes have been associated with this reaction based on different elements listed below.
+
* Reaction: [[RXN-12195]]
−
* [[Tiso_gene_10840]]
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** Assignment: ec-number
−
* [[Tiso_gene_14220]]
+
* Reaction: [[RXN-12196]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: ec-number
−
== Pathways  ==
+
* Reaction: [[RXN0-5462]]
−
* [[PWYG-321]], mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYG-321 PWYG-321]
+
** Source: [[annotation-in-silico_annotation]]
−
** '''86''' reactions found over '''182''' reactions in the full pathway
+
*** Assignment: ec-number
−
== Reconstruction information  ==
+
== Pathways associated ==
−
* [[orthology]]:
+
* [[PWY-7184]]
−
** [[pantograph]]:
+
* [[PWY-7198]]
−
*** [[esiliculosus]]
+
* [[PWY-6545]]
−
* [[annotation]]:
+
* [[PWY-7210]]
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: right end position=7164}}
−
{{#set: common name=trehalose-phosphatase}}
+
{{#set: transcription direction=NEGATIVE}}
−
{{#set: ec number=EC-3.1.3.12}}
+
{{#set: left end position=3337}}
−
{{#set: gene associated=Tiso_gene_10840|Tiso_gene_14220}}
+
{{#set: centisome position=23.172    }}
−
{{#set: in pathway=PWYG-321}}
+
{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Latest revision as of 20:03, 21 March 2018

Gene Tiso_gene_4726

  • right end position:
    • 7164
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 3337
  • centisome position:
    • 23.172
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_4726&oldid=45609"