Difference between revisions of "RXN-11334"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5224 RXN0-5224] == * direction: ** REVERSIBLE * common name: ** carbonic_anhydrase ** gamma_ca...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11334 RXN-11334] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/1.1...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5224 RXN0-5224] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11334 RXN-11334] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
−
* common name:
 
−
** carbonic_anhydrase
 
−
** gamma_carbonic_anhydrase
 
−
** ORF
 
−
** beta-type_carbonic_anhydrase
 
−
** alpha_ca
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.2.1.1 EC-4.2.1.1]
+
** [http://enzyme.expasy.org/EC/1.1.99.35 EC-1.1.99.35]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[HCO3]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[WATER]][c]
+
** 1 [[Glucopyranose]][c] '''+''' 1 [[Acceptor]][c] '''<=>''' 1 [[Donor-H2]][c] '''+''' 1 [[GLC-D-LACTONE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 hydrogencarbonate[c] '''+''' 1 H+[c] '''<=>''' 1 CO2[c] '''+''' 1 H2O[c]
+
** 1 D-glucopyranose[c] '''+''' 1 an oxidized electron acceptor[c] '''<=>''' 1 a reduced electron acceptor[c] '''+''' 1 D-glucono-1,5-lactone[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_6150]]
+
* Gene: [[Tiso_gene_3229]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_19414]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_17511]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_9852]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_18927]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_3056]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_19413]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_1600]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_20230]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_7660]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-241]], C4 photosynthetic carbon assimilation cycle, NADP-ME type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-241 PWY-241]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWYQT-4429]], CO2 fixation into oxaloacetate (anaplerotic): [http://metacyc.org/META/NEW-IMAGE?object=PWYQT-4429 PWYQT-4429]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117]
 
−
** '''7''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-7115]], C4 photosynthetic carbon assimilation cycle, NAD-ME type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7115 PWY-7115]
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-6142]], gluconeogenesis II (Methanobacterium thermoautotrophicum): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6142 PWY-6142]
 
−
** '''8''' reactions found over '''14''' reactions in the full pathway
 
−
* [[CYANCAT-PWY]], cyanate degradation: [http://metacyc.org/META/NEW-IMAGE?object=CYANCAT-PWY CYANCAT-PWY]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[esiliculosus]]
+
*** Tool: [[pantograph]]
−
* [[manual]]:
+
−
** [[primary_network]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10748 10748]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24540 24540]
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=carbonic_anhydrase}}
+
{{#set: ec number=EC-1.1.99.35}}
−
{{#set: common name=gamma_carbonic_anhydrase}}
+
{{#set: gene associated=Tiso_gene_3229}}
−
{{#set: common name=ORF}}
+
{{#set: in pathway=}}
−
{{#set: common name=beta-type_carbonic_anhydrase}}
+
−
{{#set: common name=alpha_ca}}
+
−
{{#set: ec number=EC-4.2.1.1}}
+
−
{{#set: gene associated=Tiso_gene_6150|Tiso_gene_19414|Tiso_gene_17511|Tiso_gene_9852|Tiso_gene_18927|Tiso_gene_3056|Tiso_gene_19413|Tiso_gene_1600|Tiso_gene_20230|Tiso_gene_7660}}
+
−
{{#set: in pathway=PWY-241|PWYQT-4429|PWY-7117|PWY-7115|PWY-6142|CYANCAT-PWY}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-esiliculosus}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=esiliculosus}}
 
−
{{#set: reconstruction category=manual}}
 
−
{{#set: reconstruction source=primary_network}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
 

Latest revision as of 21:03, 21 March 2018

Reaction RXN-11334

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 D-glucopyranose[c] + 1 an oxidized electron acceptor[c] <=> 1 a reduced electron acceptor[c] + 1 D-glucono-1,5-lactone[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-11334&oldid=45614"