Difference between revisions of "RXN-7974"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9516 RXN-9516] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxo-hexanoyl-[acyl-carrier...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7974 RXN-7974] == * direction: ** LEFT-TO-RIGHT * common name: ** 9-cis-epoxycarotenoid_dioxyge...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9516 RXN-9516] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7974 RXN-7974] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** 3-oxo-hexanoyl-[acyl-carrier protein] synthase
+
** 9-cis-epoxycarotenoid_dioxygenase
** 3-oxoacyl-synthase
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** 9-cis-epoxycarotenoid_neoxanthin_cleavage_enzyme-like_protein
 
* ec number:
 
* ec number:
** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
+
** [http://enzyme.expasy.org/EC/1.13.11.51 EC-1.13.11.51]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[Butanoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[MALONYL-ACP]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[3-oxo-hexanoyl-ACPs]][c]
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** 1 [[CPD-7196]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-7280]][c] '''+''' 1 [[CPD-7279]][c]
 
* With common name(s):
 
* With common name(s):
** 1 a butyryl-[acp][c] '''+''' 1 H+[c] '''+''' 1 a malonyl-[acp][c] '''=>''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 CO2[c] '''+''' 1 a 3-oxo-hexanoyl-[acp][c]
+
** 1 9-cis-violaxanthin[c] '''+''' 1 oxygen[c] '''=>''' 1 (3S,5R,6S)-5,6-epoxy-3-hydroxy-5,6-dihydro-12'-apo-β-caroten-12'-al[c] '''+''' 1 2-cis,4-trans-xanthoxin[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[Tiso_gene_19302]]
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* Gene: [[Tiso_gene_4653]]
** [[pantograph]]-[[synechocystis]]
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** Source: [[annotation-in-silico_annotation]]
** [[pantograph]]-[[esiliculosus]]
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*** Assignment: EC-NUMBER
* [[Tiso_gene_15991]]
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* Gene: [[Tiso_gene_7740]]
** [[pantograph]]-[[athaliana]]
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** Source: [[annotation-in-silico_annotation]]
** [[pantograph]]-[[athaliana]]
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*** Assignment: EC-NUMBER
** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_14485]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_5939]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
 
** '''31''' reactions found over '''31''' reactions in the full pathway
 
* [[PWY-7388]], octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7388 PWY-7388]
 
** '''9''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
+
* Category: [[annotation]]
** [[pantograph]]:
+
** Source: [[annotation-in-silico_annotation]]
*** [[synechocystis]]
+
*** Tool: [[pathwaytools]]
*** [[esiliculosus]]
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*** [[athaliana]]
+
* [[manual]]:
+
** [[primary_network]]
+
* [[annotation]]:
+
** [[pathwaytools]]:
+
*** [[experimental_annotation]]
+
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16541 16541]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R06953 R06953]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=3-oxo-hexanoyl-[acyl-carrier protein] synthase}}
+
{{#set: common name=9-cis-epoxycarotenoid_dioxygenase}}
{{#set: common name=3-oxoacyl-synthase}}
+
{{#set: common name=9-cis-epoxycarotenoid_neoxanthin_cleavage_enzyme-like_protein}}
{{#set: ec number=EC-2.3.1.41}}
+
{{#set: ec number=EC-1.13.11.51}}
{{#set: gene associated=Tiso_gene_19302|Tiso_gene_15991|Tiso_gene_14485|Tiso_gene_5939}}
+
{{#set: gene associated=Tiso_gene_4653|Tiso_gene_7740}}
{{#set: in pathway=PWY-5971|PWY-7388}}
+
{{#set: in pathway=}}
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=synechocystis|esiliculosus|athaliana}}
+
{{#set: reconstruction category=manual}}
+
{{#set: reconstruction source=primary_network}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
 

Latest revision as of 20:04, 21 March 2018

Reaction RXN-7974

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 9-cis-epoxycarotenoid_dioxygenase
    • 9-cis-epoxycarotenoid_neoxanthin_cleavage_enzyme-like_protein
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 9-cis-violaxanthin[c] + 1 oxygen[c] => 1 (3S,5R,6S)-5,6-epoxy-3-hydroxy-5,6-dihydro-12'-apo-β-caroten-12'-al[c] + 1 2-cis,4-trans-xanthoxin[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links