Difference between revisions of "Tiso gene 12148"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.3.2.8-RXN 3.3.2.8-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** limonene-12-epoxide_hyd...")
(Created page with "Category:Gene == Gene Tiso_gene_12148 == * right end position: ** 6488 * transcription direction: ** NEGATIVE * left end position: ** 2173 * centisome position: ** 29.9270...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.3.2.8-RXN 3.3.2.8-RXN] ==
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== Gene Tiso_gene_12148 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 6488
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* common name:
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* transcription direction:
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** limonene-12-epoxide_hydrolase_protein
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** NEGATIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/3.3.2.8 EC-3.3.2.8]
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** 2173
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* centisome position:
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** 29.927006   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ATPASE-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[4R-Limonene-1-2-epoxides]][c] '''=>''' 1 [[CPD-8222]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 H2O[c] '''+''' 1 a (4R)-1,2-epoxymenth-8-ene[c] '''=>''' 1 (1S,2S,4R)-limonene-1,2-diol[c]
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* Reaction: [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-12195]]
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* [[Tiso_gene_15422]]
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** Source: [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** Assignment: ec-number
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***AUTOMATED-NAME-MATCH
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* Reaction: [[RXN-12196]]
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== Pathways  ==
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-5923]], limonene degradation I (D-limonene): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5923 PWY-5923]
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*** Assignment: ec-number
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** '''1''' reactions found over '''7''' reactions in the full pathway
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* Reaction: [[RXN0-5462]]
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== Reconstruction information  ==
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** Source: [[annotation-in-silico_annotation]]
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* [[annotation]]:
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*** Assignment: ec-number
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** [[pathwaytools]]:
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== Pathways associated ==
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*** [[in-silico_annotation]]
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* [[PWY-7184]]
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* [[PWY-7198]]
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* [[PWY-6545]]
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* [[PWY-7210]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=6488}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10700 10700]
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{{#set: transcription direction=NEGATIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=2173}}
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{{#set: common name=limonene-12-epoxide_hydrolase_protein}}
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{{#set: centisome position=29.927006    }}
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{{#set: ec number=EC-3.3.2.8}}
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{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
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{{#set: gene associated=Tiso_gene_15422}}
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{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
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{{#set: in pathway=PWY-5923}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 20:05, 21 March 2018

Gene Tiso_gene_12148

  • right end position:
    • 6488
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 2173
  • centisome position:
    • 29.927006
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_12148&oldid=45787"