Difference between revisions of "RXN-14264"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9673 RXN-9673] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** long_c...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14264 RXN-14264] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/1.3...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9673 RXN-9673] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14264 RXN-14264] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
−
* common name:
+
−
** polyketide_synthase
+
−
** long_chain_acyl-_synthetase
+
−
** acyl-_synthetase
+
−
** ORF
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
+
** [http://enzyme.expasy.org/EC/1.3.8.4 EC-1.3.8.4]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[LINOLEIC_ACID]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[CPD-18]][c]
+
** 1 [[ISOVALERYL-COA]][c] '''+''' 1 [[FAD]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[3-METHYL-CROTONYL-COA]][c] '''+''' 1 [[FADH2]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 coenzyme A[c] '''+''' 1 linoleate[c] '''=>''' 1 diphosphate[c] '''+''' 1 AMP[c] '''+''' 1 linoleoyl-CoA[c]
+
** 1 isovaleryl-CoA[c] '''+''' 1 FAD[c] '''+''' 1 H+[c] '''<=>''' 1 3-methylcrotonyl-CoA[c] '''+''' 1 FADH2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_13394]]
+
* Gene: [[Tiso_gene_8272]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-athaliana]]
−
***EC-NUMBER
+
** Source: [[orthology-esiliculosus]]
−
* [[Tiso_gene_348]]
+
* Gene: [[Tiso_gene_14511]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_18542]]
−
** EXPERIMENTAL_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_6475]]
−
* [[Tiso_gene_500]]
+
** Source: [[orthology-esiliculosus]]
−
** IN-SILICO_ANNOTATION
+
* Gene: [[Tiso_gene_10643]]
−
***EC-NUMBER
+
** Source: [[orthology-athaliana]]
−
* [[Tiso_gene_136]]
+
** Source: [[orthology-esiliculosus]]
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_9394]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_135]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_4191]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_10876]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_7855]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6000]], &gamma;-linolenate biosynthesis II (animals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6000 PWY-6000]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-athaliana]]
−
*** [[esiliculosus]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
** Source: [[orthology-esiliculosus]]
−
** [[pathwaytools]]:
+
*** Tool: [[pantograph]]
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33652 33652]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31064 31064]
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* LIGAND-RXN:
−
{{#set: common name=polyketide_synthase}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R04095 R04095]
−
{{#set: common name=long_chain_acyl-_synthetase}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=acyl-_synthetase}}
+
{{#set: ec number=EC-1.3.8.4}}
−
{{#set: common name=ORF}}
+
{{#set: gene associated=Tiso_gene_8272|Tiso_gene_14511|Tiso_gene_18542|Tiso_gene_6475|Tiso_gene_10643}}
−
{{#set: ec number=EC-6.2.1.3}}
+
{{#set: in pathway=}}
−
{{#set: gene associated=Tiso_gene_13394|Tiso_gene_348|Tiso_gene_500|Tiso_gene_136|Tiso_gene_9394|Tiso_gene_135|Tiso_gene_4191|Tiso_gene_10876|Tiso_gene_7855}}
+
−
{{#set: in pathway=PWY-6000}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=esiliculosus}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
 

Latest revision as of 20:05, 21 March 2018

Reaction RXN-14264

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-14264&oldid=45823"