Difference between revisions of "H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6524 RXN0-6524] == * direction: ** LEFT-TO-RIGHT * common name: ** exosome_complex_exonuclease...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN] == * direction: ** LEFT-TO-RIG...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6524 RXN0-6524] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** exosome_complex_exonuclease
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.1.13.1 EC-3.1.13.1]
+
** [http://enzyme.expasy.org/EC/3.6.1.67 EC-3.6.1.67]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[RNASE-II-POLY-A-SUBSTRATE-MRNA]][c] '''+''' n [[WATER]][c] '''=>''' n [[AMP]][c] '''+''' 1 [[RNASE-II-SUBSTRATE-WITH-NO-POLY-A-TAIL]][c]
+
** 1 [[DIHYDRONEOPTERIN-P3]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[DIHYDRONEOPTERIN-P]][c] '''+''' 1 [[PPI]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 RNase II poly-A substrate mRNA[c] '''+''' n H2O[c] '''=>''' n AMP[c] '''+''' 1 RNase II substrate with no poly-A tail[c]
+
** 1 7,8-dihydroneopterin 3'-triphosphate[c] '''+''' 1 H2O[c] '''=>''' 1 H+[c] '''+''' 1 7,8-dihydroneopterin 3'-phosphate[c] '''+''' 1 diphosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_11612]]
+
* Gene: [[Tiso_gene_17804]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_12636]]
−
* [[Tiso_gene_11613]]
+
** Source: [[orthology-esiliculosus]]
−
** IN-SILICO_ANNOTATION
+
* Gene: [[Tiso_gene_15582]]
−
***EC-NUMBER
+
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_12514]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_13784]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_13729]]
 +
** Source: [[orthology-athaliana]]
 +
* Gene: [[Tiso_gene_43]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_277]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_14428]]
 +
** Source: [[orthology-synechocystis]]
 +
* Gene: [[Tiso_gene_11387]]
 +
** Source: [[orthology-athaliana]]
 +
* Gene: [[Tiso_gene_15988]]
 +
** Source: [[orthology-synechocystis]]
 +
* Gene: [[Tiso_gene_2019]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_10288]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_19075]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_8600]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_5713]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_8601]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_18343]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_2924]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_10158]]
 +
** Source: [[orthology-athaliana]]
 +
* Gene: [[Tiso_gene_16176]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_6277]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_13847]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_3667]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_1142]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_17467]]
 +
** Source: [[orthology-athaliana]]
 +
* Gene: [[Tiso_gene_8599]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_6144]]
 +
** Source: [[orthology-athaliana]]
 +
* Gene: [[Tiso_gene_7067]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_2747]]
 +
** Source: [[orthology-synechocystis]]
 +
* Gene: [[Tiso_gene_1799]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_3314]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_13604]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_4112]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_10760]]
 +
** Source: [[orthology-synechocystis]]
 +
* Gene: [[Tiso_gene_16712]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_6767]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_4645]]
 +
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-6147]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6147 PWY-6147]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-athaliana]]
−
*** [[in-silico_annotation]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-synechocystis]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25302 25302]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R04638 R04638]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=exosome_complex_exonuclease}}
+
{{#set: ec number=EC-3.6.1.67}}
−
{{#set: ec number=EC-3.1.13.1}}
+
{{#set: gene associated=Tiso_gene_17804|Tiso_gene_12636|Tiso_gene_15582|Tiso_gene_12514|Tiso_gene_13784|Tiso_gene_13729|Tiso_gene_43|Tiso_gene_277|Tiso_gene_14428|Tiso_gene_11387|Tiso_gene_15988|Tiso_gene_2019|Tiso_gene_10288|Tiso_gene_19075|Tiso_gene_8600|Tiso_gene_5713|Tiso_gene_8601|Tiso_gene_18343|Tiso_gene_2924|Tiso_gene_10158|Tiso_gene_16176|Tiso_gene_6277|Tiso_gene_13847|Tiso_gene_3667|Tiso_gene_1142|Tiso_gene_17467|Tiso_gene_8599|Tiso_gene_6144|Tiso_gene_7067|Tiso_gene_2747|Tiso_gene_1799|Tiso_gene_3314|Tiso_gene_13604|Tiso_gene_4112|Tiso_gene_10760|Tiso_gene_16712|Tiso_gene_6767|Tiso_gene_4645}}
−
{{#set: gene associated=Tiso_gene_11612|Tiso_gene_11613}}
+
{{#set: in pathway=PWY-6147}}
−
{{#set: in pathway=}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction source=orthology-athaliana|orthology-synechocystis|orthology-esiliculosus}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=in-silico_annotation}}
+

Latest revision as of 21:05, 21 March 2018

Reaction H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6147, 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I: PWY-6147
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links




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