Difference between revisions of "BRANCHED-CHAINAMINOTRANSFERILEU-RXN"
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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=2-ALPHA-HYDROXYETHYL-THPP 2-ALPHA-HYDROXYETHYL-THPP] == * smiles: ** CC2(=C(SC(C(C)O)=[N+](CC1(...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=BRANCHED-CHAINAMINOTRANSFERILEU-RXN BRANCHED-CHAINAMINOTRANSFERILEU-RXN] == * direction: ** REVERSI...") |
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− | [[Category: | + | [[Category:Reaction]] |
− | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=BRANCHED-CHAINAMINOTRANSFERILEU-RXN BRANCHED-CHAINAMINOTRANSFERILEU-RXN] == |
− | * | + | * direction: |
− | ** | + | ** REVERSIBLE |
− | + | ||
− | + | ||
* common name: | * common name: | ||
− | ** | + | ** branched-chain_amino_acid_aminotransferase |
− | * | + | * ec number: |
− | ** | + | ** [http://enzyme.expasy.org/EC/2.6.1.42 EC-2.6.1.42] |
* Synonym(s): | * Synonym(s): | ||
− | |||
− | |||
− | == Reaction(s) | + | == Reaction Formula == |
− | * [[ | + | * With identifiers: |
− | == | + | ** 1 [[ILE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[2-KETO-3-METHYL-VALERATE]][c] |
− | * [[ | + | * With common name(s): |
− | == | + | ** 1 L-isoleucine[c] '''+''' 1 2-oxoglutarate[c] '''<=>''' 1 L-glutamate[c] '''+''' 1 (S)-3-methyl-2-oxopentanoate[c] |
− | * [[ | + | |
+ | == Genes associated with this reaction == | ||
+ | Genes have been associated with this reaction based on different elements listed below. | ||
+ | * Gene: [[Tiso_gene_14984]] | ||
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Assignment: EC-NUMBER | ||
+ | ** Source: [[annotation-experimental_annotation]] | ||
+ | *** Assignment: EC-NUMBER | ||
+ | ** Source: [[orthology-athaliana]] | ||
+ | ** Source: [[orthology-synechocystis]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | ** Source: [[orthology-creinhardtii]] | ||
+ | * Gene: [[Tiso_gene_18403]] | ||
+ | ** Source: [[orthology-synechocystis]] | ||
+ | * Gene: [[Tiso_gene_17748]] | ||
+ | ** Source: [[orthology-athaliana]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | == Pathways == | ||
+ | * [[ILEUSYN-PWY]], L-isoleucine biosynthesis I (from threonine): [http://metacyc.org/META/NEW-IMAGE?object=ILEUSYN-PWY ILEUSYN-PWY] | ||
+ | ** '''7''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[ILEUDEG-PWY]], L-isoleucine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=ILEUDEG-PWY ILEUDEG-PWY] | ||
+ | ** '''4''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-5108]], L-isoleucine biosynthesis V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5108 PWY-5108] | ||
+ | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-5103]], L-isoleucine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5103 PWY-5103] | ||
+ | ** '''4''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY-5101]], L-isoleucine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5101 PWY-5101] | ||
+ | ** '''5''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[PWY-5078]], L-isoleucine degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5078 PWY-5078] | ||
+ | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-5104]], L-isoleucine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5104 PWY-5104] | ||
+ | ** '''3''' reactions found over '''6''' reactions in the full pathway | ||
+ | == Reconstruction information == | ||
+ | * Category: [[orthology]] | ||
+ | ** Source: [[orthology-athaliana]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | ** Source: [[orthology-creinhardtii]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | ** Source: [[orthology-synechocystis]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | * Category: [[manual]] | ||
+ | ** Source: [[manual-primary_network]] | ||
+ | * Category: [[annotation]] | ||
+ | ** Source: [[annotation-experimental_annotation]] | ||
+ | *** Tool: [[pathwaytools]] | ||
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
− | * | + | * RHEA: |
− | ** [http:// | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24801 24801] |
− | * | + | * LIGAND-RXN: |
− | ** [http://www. | + | ** [http://www.genome.jp/dbget-bin/www_bget?R02199 R02199] |
− | + | * UNIPROT: | |
− | {{#set: | + | ** [http://www.uniprot.org/uniprot/Q9PIM6 Q9PIM6] |
− | {{#set: common name= | + | ** [http://www.uniprot.org/uniprot/P38891 P38891] |
− | {{#set: | + | ** [http://www.uniprot.org/uniprot/P47176 P47176] |
− | {{#set: | + | ** [http://www.uniprot.org/uniprot/O86505 O86505] |
− | {{#set: | + | ** [http://www.uniprot.org/uniprot/O14370 O14370] |
− | {{#set: | + | ** [http://www.uniprot.org/uniprot/O32954 O32954] |
− | {{#set: | + | ** [http://www.uniprot.org/uniprot/P0AB80 P0AB80] |
+ | {{#set: direction=REVERSIBLE}} | ||
+ | {{#set: common name=branched-chain_amino_acid_aminotransferase}} | ||
+ | {{#set: ec number=EC-2.6.1.42}} | ||
+ | {{#set: gene associated=Tiso_gene_14984|Tiso_gene_18403|Tiso_gene_17748}} | ||
+ | {{#set: in pathway=ILEUSYN-PWY|ILEUDEG-PWY|PWY-5108|PWY-5103|PWY-5101|PWY-5078|PWY-5104}} | ||
+ | {{#set: reconstruction category=orthology|manual|annotation}} | ||
+ | {{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}} | ||
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Latest revision as of 20:06, 21 March 2018
Contents
Reaction BRANCHED-CHAINAMINOTRANSFERILEU-RXN
- direction:
- REVERSIBLE
- common name:
- branched-chain_amino_acid_aminotransferase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 ILE[c] + 1 2-KETOGLUTARATE[c] <=> 1 GLT[c] + 1 2-KETO-3-METHYL-VALERATE[c]
- With common name(s):
- 1 L-isoleucine[c] + 1 2-oxoglutarate[c] <=> 1 L-glutamate[c] + 1 (S)-3-methyl-2-oxopentanoate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_14984
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-experimental_annotation
- Assignment: EC-NUMBER
- Source: orthology-athaliana
- Source: orthology-synechocystis
- Source: orthology-esiliculosus
- Source: orthology-creinhardtii
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_18403
- Source: orthology-synechocystis
- Gene: Tiso_gene_17748
- Source: orthology-athaliana
- Source: orthology-esiliculosus
Pathways
- ILEUSYN-PWY, L-isoleucine biosynthesis I (from threonine): ILEUSYN-PWY
- 7 reactions found over 7 reactions in the full pathway
- ILEUDEG-PWY, L-isoleucine degradation I: ILEUDEG-PWY
- 4 reactions found over 6 reactions in the full pathway
- PWY-5108, L-isoleucine biosynthesis V: PWY-5108
- 2 reactions found over 3 reactions in the full pathway
- PWY-5103, L-isoleucine biosynthesis III: PWY-5103
- 4 reactions found over 7 reactions in the full pathway
- PWY-5101, L-isoleucine biosynthesis II: PWY-5101
- 5 reactions found over 8 reactions in the full pathway
- PWY-5078, L-isoleucine degradation II: PWY-5078
- 2 reactions found over 3 reactions in the full pathway
- PWY-5104, L-isoleucine biosynthesis IV: PWY-5104
- 3 reactions found over 6 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-athaliana
- Tool: pantograph
- Source: orthology-creinhardtii
- Tool: pantograph
- Source: orthology-synechocystis
- Tool: pantograph
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-athaliana
- Category: manual
- Source: manual-primary_network
- Category: annotation
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
External links