Difference between revisions of "Tiso gene 18607"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11486 RXN-11486] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Gene == Gene Tiso_gene_18607 == * right end position: ** 2874 * transcription direction: ** POSITIVE * left end position: ** 2 * centisome position: ** 6.86106300...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11486 RXN-11486] ==
+
== Gene Tiso_gene_18607 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 2874
−
* ec number:
+
* transcription direction:
−
** [http://enzyme.expasy.org/EC/2.5.1.85 EC-2.5.1.85]
+
** POSITIVE
 +
* left end position:
 +
** 2
 +
* centisome position:
 +
** 6.86106300e-2
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[ALANINE--TRNA-LIGASE-RXN]]
−
** 1 [[GERANYLGERANYL-PP]][c] '''+''' 5 [[DELTA3-ISOPENTENYL-PP]][c] '''=>''' 5 [[PPI]][c] '''+''' 1 [[SOLANESYL-PYROPHOSPHATE]][c]
+
** Source: [[annotation-in-silico_annotation]]
−
* With common name(s):
+
*** Assignment: ec-number
−
** 1 geranylgeranyl diphosphate[c] '''+''' 5 isopentenyl diphosphate[c] '''=>''' 5 diphosphate[c] '''+''' 1 all-trans-nonaprenyl diphosphate[c]
+
** Source: [[annotation-experimental_annotation]]
−
 
+
*** Assignment: ec-number
−
== Genes associated with this reaction  ==
+
== Pathways associated ==
−
Genes have been associated with this reaction based on different elements listed below.
+
* [[TRNA-CHARGING-PWY]]
−
* [[Tiso_gene_18201]]
+
−
** [[pantograph]]-[[synechocystis]]
+
−
* [[Tiso_gene_2848]]
+
−
** [[pantograph]]-[[synechocystis]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
== Pathways ==
+
−
* [[PWY-6520]], nonaprenyl diphosphate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6520 PWY-6520]
+
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[synechocystis]]
+
−
*** [[esiliculosus]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: right end position=2874}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27594 27594]
+
{{#set: transcription direction=POSITIVE}}
−
* LIGAND-RXN:
+
{{#set: left end position=2}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R09251 R09251]
+
{{#set: centisome position=6.86106300e-2}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: reaction associated=ALANINE--TRNA-LIGASE-RXN}}
−
{{#set: ec number=EC-2.5.1.85}}
+
{{#set: pathway associated=TRNA-CHARGING-PWY}}
−
{{#set: gene associated=Tiso_gene_18201|Tiso_gene_2848}}
+
−
{{#set: in pathway=PWY-6520}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=synechocystis|esiliculosus}}
+

Latest revision as of 20:06, 21 March 2018

Gene Tiso_gene_18607

  • right end position:
    • 2874
  • transcription direction:
    • POSITIVE
  • left end position:
    • 2
  • centisome position:
    • 6.86106300e-2
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_18607&oldid=46009"