Difference between revisions of "RXN-10994"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.224-RXN 2.4.1.224-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** exostosin-1 ** prob...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10994 RXN-10994] == * direction: ** REVERSIBLE * common name: ** 4_-phosphopantetheinyl_transfe...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.224-RXN 2.4.1.224-RXN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10994 RXN-10994] ==
 
* direction:
 
* direction:
** LEFT-TO-RIGHT
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** REVERSIBLE
 
* common name:
 
* common name:
** exostosin-1
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** 4_-phosphopantetheinyl_transferase
** probable_glycosyltransferase
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* ec number:
 
* ec number:
** [http://enzyme.expasy.org/EC/2.4.1.224 EC-2.4.1.224]
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** [http://enzyme.expasy.org/EC/2.7.8.7 EC-2.7.8.7]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[UDP-N-ACETYL-D-GLUCOSAMINE]][c] '''+''' 1 [[GlcA-GlcNAc-GlcA-Gal-Gal-Xyl-Protein]][c] '''=>''' 1 [[GlcNAc-GlcA-GlcNAc-GlcA-Gal-Gal-Xyl-Core]][c] '''+''' 1 [[UDP]][c] '''+''' 1 [[PROTON]][c]
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** 1 [[CO-A]][c] '''+''' 1 [[VibB]][c] '''<=>''' 1 [[3-5-ADP]][c] '''+''' 1 [[holo-VibB]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
** 1 UDP-N-acetyl-&alpha;-D-glucosamine[c] '''+''' 1 a [protein]-3-O-(&beta;-D-GlcA-(1&rarr;3)-&alpha;-D-GlcNAc-(1&rarr;4)-&beta;-D-GlcA-(1&rarr;3)-&beta;-D-Gal-(1&rarr;3)-&beta;-D-Gal-(1&rarr;4)-&beta;-D-Xyl)-L-serine[c] '''=>''' 1 a [protein]-3-O-(&alpha;-D-GlcNAc-(1&rarr;4)-&beta;-D-GlcA-(1&rarr;3)-&alpha;-D-GlcNAc-(1&rarr;4)-&beta;-D-GlcA-(1&rarr;3)-&beta;-D-Gal-(1&rarr;3)-&beta;-D-Gal-(1&rarr;4)-&beta;-D-Xyl)-L-serine[c] '''+''' 1 UDP[c] '''+''' 1 H+[c]
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** 1 coenzyme A[c] '''+''' 1 an apo-[VibB aryl-carrier protein][c] '''<=>''' 1 adenosine 3',5'-bisphosphate[c] '''+''' 1 a holo-[VibB aryl-carrier protein][c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[Tiso_gene_6495]]
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* Gene: [[Tiso_gene_14278]]
** IN-SILICO_ANNOTATION
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** Source: [[annotation-in-silico_annotation]]
***EC-NUMBER
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*** Assignment: EC-NUMBER
* [[Tiso_gene_6496]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
 
== Pathways  ==
* [[PWY-6558]], heparan sulfate biosynthesis (late stages): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6558 PWY-6558]
 
** '''3''' reactions found over '''13''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[annotation]]:
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* Category: [[annotation]]
** [[pathwaytools]]:
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** Source: [[annotation-in-silico_annotation]]
*** [[in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
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{{#set: direction=REVERSIBLE}}
** [http://www.genome.jp/dbget-bin/www_bget?R07334 R07334]
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{{#set: common name=4_-phosphopantetheinyl_transferase}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-2.7.8.7}}
{{#set: common name=exostosin-1}}
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{{#set: gene associated=Tiso_gene_14278}}
{{#set: common name=probable_glycosyltransferase}}
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{{#set: in pathway=}}
{{#set: ec number=EC-2.4.1.224}}
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{{#set: gene associated=Tiso_gene_6495|Tiso_gene_6496}}
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{{#set: in pathway=PWY-6558}}
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{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
{{#set: reconstruction source=in-silico_annotation}}
 

Latest revision as of 20:06, 21 March 2018

Reaction RXN-10994

  • direction:
    • REVERSIBLE
  • common name:
    • 4_-phosphopantetheinyl_transferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 coenzyme A[c] + 1 an apo-[VibB aryl-carrier protein][c] <=> 1 adenosine 3',5'-bisphosphate[c] + 1 a holo-[VibB aryl-carrier protein][c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links