Difference between revisions of "Tiso gene 10282"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-170 CPD-170] == * smiles: ** C(O)C1(C(O)C(O)C(O)C(O1)OCC4(C(O)C(O)C(O)C(OCC3(C(O)C(O)C(O)C(...")
(Created page with "Category:Gene == Gene Tiso_gene_10282 == * right end position: ** 8609 * transcription direction: ** POSITIVE * left end position: ** 3609 * centisome position: ** 41.6359...")
 
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[[Category:Metabolite]]
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[[Category:Gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-170 CPD-170] ==
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== Gene Tiso_gene_10282 ==
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* smiles:
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* right end position:
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** C(O)C1(C(O)C(O)C(O)C(O1)OCC4(C(O)C(O)C(O)C(OCC3(C(O)C(O)C(O)C(OC2(CO)(C(O)C(O)C(CO)O2))O3))O4))
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** 8609
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* inchi key:
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* transcription direction:
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** InChIKey=UQZIYBXSHAGNOE-XNSRJBNMSA-N
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** POSITIVE
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* common name:
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* left end position:
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** stachyose
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** 3609
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* molecular weight:
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* centisome position:
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** 666.583    
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** 41.635902    
 
* Synonym(s):
 
* Synonym(s):
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** (2R,3R,4S,5S,6R)-2-[[(2R,3S,4S,5R,6R)-6-[(2R,3R,4S,5R,6R)-6-[(2S,3S,4R,5S)-3,4-dihydroxy-2,5-bis(hydroxymethyl)oxolan-2-yl]oxy-4,5-dihydroxy-2-(hydroxymethyl)oxan-3-yl]oxy-3,4,5-trihydroxy-oxan-2-yl]methoxy]-6-(hydroxymethyl)oxane-3,4,5-triol
 
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** α-D-Galp-(1->6)-α-D-Galp-(1->6)-α-D-Glcp-(1->2)-β-D-Fruf
 
  
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== Reaction(s) known to consume the compound ==
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== Reactions associated ==
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* [[RXN-11501]]
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* Reaction: [[ATPASE-RXN]]
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== Reaction(s) known to produce the compound ==
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** Source: [[annotation-in-silico_annotation]]
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== Reaction(s) of unknown directionality ==
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*** Assignment: ec-number
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* [[2.4.1.67-RXN]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-12195]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-12196]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN0-5462]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-7184]]
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* [[PWY-7198]]
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* [[PWY-6545]]
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* [[PWY-7210]]
 
== External links  ==
 
== External links  ==
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* CAS : 10094-58-3
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{{#set: right end position=8609}}
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* PUBCHEM:
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{{#set: transcription direction=POSITIVE}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=439531 439531]
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{{#set: left end position=3609}}
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* KEGG-GLYCAN : G00278
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{{#set: centisome position=41.635902   }}
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* HMDB : HMDB03553
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{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
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* LIGAND-CPD:
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{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
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** [http://www.genome.jp/dbget-bin/www_bget?C01613 C01613]
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* CHEMSPIDER:
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** [http://www.chemspider.com/Chemical-Structure.388624.html 388624]
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* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=17164 17164]
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{{#set: smiles=C(O)C1(C(O)C(O)C(O)C(O1)OCC4(C(O)C(O)C(O)C(OCC3(C(O)C(O)C(O)C(OC2(CO)(C(O)C(O)C(CO)O2))O3))O4))}}
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−
{{#set: inchi key=InChIKey=UQZIYBXSHAGNOE-XNSRJBNMSA-N}}
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−
{{#set: common name=stachyose}}
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−
{{#set: molecular weight=666.583   }}
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−
{{#set: common name=(2R,3R,4S,5S,6R)-2-[[(2R,3S,4S,5R,6R)-6-[(2R,3R,4S,5R,6R)-6-[(2S,3S,4R,5S)-3,4-dihydroxy-2,5-bis(hydroxymethyl)oxolan-2-yl]oxy-4,5-dihydroxy-2-(hydroxymethyl)oxan-3-yl]oxy-3,4,5-trihydroxy-oxan-2-yl]methoxy]-6-(hydroxymethyl)oxane-3,4,5-triol|α-D-Galp-(1->6)-α-D-Galp-(1->6)-α-D-Glcp-(1->2)-β-D-Fruf}}
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{{#set: consumed by=RXN-11501}}
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{{#set: consumed or produced by=2.4.1.67-RXN}}
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Latest revision as of 20:06, 21 March 2018

Gene Tiso_gene_10282

  • right end position:
    • 8609
  • transcription direction:
    • POSITIVE
  • left end position:
    • 3609
  • centisome position:
    • 41.635902
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_10282&oldid=46021"