Difference between revisions of "RXN-12171"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=FE+3 FE+3] == * smiles: ** [Fe+++] * inchi key: ** InChIKey=VTLYFUHAOXGGBS-UHFFFAOYSA-N * commo...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12171 RXN-12171] == * direction: ** REVERSIBLE * common name: ** thymidine_phosphorylase * ec n...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=FE+3 FE+3] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12171 RXN-12171] ==
* smiles:
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* direction:
** [Fe+++]
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** REVERSIBLE
* inchi key:
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** InChIKey=VTLYFUHAOXGGBS-UHFFFAOYSA-N
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* common name:
 
* common name:
** Fe3+
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** thymidine_phosphorylase
* molecular weight:
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* ec number:
** 55.847   
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** [http://enzyme.expasy.org/EC/2.4.1.1 EC-2.4.1.1]
 
* Synonym(s):
 
* Synonym(s):
** ferric iron
 
** Fe+++
 
** Fe+3
 
** ferric ion
 
** fe(iii)
 
  
== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
* [[TransportSeed_FE+3]]
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* With identifiers:
* [[RXN-14387]]
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** 1 [[Pi]][c] '''+''' 1 [[Maltodextrins]][c] '''<=>''' 1 [[GLC-1-P]][c] '''+''' 1 [[Maltodextrins]][c]
== Reaction(s) known to produce the compound ==
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* With common name(s):
* [[TransportSeed_FE+3]]
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** 1 phosphate[c] '''+''' 1 a maltodextrin[c] '''<=>''' 1 &alpha;-D-glucopyranose 1-phosphate[c] '''+''' 1 a maltodextrin[c]
* [[RXN-12540]]
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* [[RXN-12541]]
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== Genes associated with this reaction  ==
== Reaction(s) of unknown directionality ==
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Genes have been associated with this reaction based on different elements listed below.
* [[ExchangeSeed_FE+3]]
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* Gene: [[Tiso_gene_1011]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-6731]], starch degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6731 PWY-6731]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6737]], starch degradation V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6737 PWY-6737]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
* METABOLIGHTS : MTBLC29034
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{{#set: direction=REVERSIBLE}}
* PUBCHEM:
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{{#set: common name=thymidine_phosphorylase}}
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=29936 29936]
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{{#set: ec number=EC-2.4.1.1}}
* HMDB : HMDB12943
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{{#set: gene associated=Tiso_gene_1011}}
* LIGAND-CPD:
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{{#set: in pathway=PWY-6731|PWY-6737}}
** [http://www.genome.jp/dbget-bin/www_bget?C14819 C14819]
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{{#set: reconstruction category=annotation}}
* CHEMSPIDER:
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{{#set: reconstruction source=annotation-in-silico_annotation}}
** [http://www.chemspider.com/Chemical-Structure.27815.html 27815]
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{{#set: reconstruction tool=pathwaytools}}
* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=29034 29034]
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* BIGG : fe3
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{{#set: smiles=[Fe+++]}}
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{{#set: inchi key=InChIKey=VTLYFUHAOXGGBS-UHFFFAOYSA-N}}
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{{#set: common name=Fe3+}}
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{{#set: molecular weight=55.847    }}
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{{#set: common name=ferric iron|Fe+++|Fe+3|ferric ion|fe(iii)}}
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{{#set: consumed by=TransportSeed_FE+3|RXN-14387}}
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{{#set: produced by=TransportSeed_FE+3|RXN-12540|RXN-12541}}
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{{#set: consumed or produced by=ExchangeSeed_FE+3}}
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Latest revision as of 20:07, 21 March 2018

Reaction RXN-12171

  • direction:
    • REVERSIBLE
  • common name:
    • thymidine_phosphorylase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 phosphate[c] + 1 a maltodextrin[c] <=> 1 α-D-glucopyranose 1-phosphate[c] + 1 a maltodextrin[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6731, starch degradation III: PWY-6731
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-6737, starch degradation V: PWY-6737
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links