Difference between revisions of "Tiso gene 6458"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15124 RXN-15124] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...")
(Created page with "Category:Gene == Gene Tiso_gene_6458 == * right end position: ** 6768 * transcription direction: ** POSITIVE * left end position: ** 1597 * centisome position: ** 13.08587...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15124 RXN-15124] ==
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== Gene Tiso_gene_6458 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 6768
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* transcription direction:
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** POSITIVE
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* left end position:
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** 1597
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* centisome position:
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** 13.085874   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[2.7.7.11-RXN]]
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** 1 [[2-AMINOACRYLATE]][c] '''=>''' 1 [[CPD-16015]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 2-aminoprop-2-enoate[c] '''=>''' 1 2-iminopropanoate[c]
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* Reaction: [[2.7.7.44-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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== Pathways  ==
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* Reaction: [[GLUC1PURIDYLTRANS-RXN]]
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* [[PWY0-1535]], D-serine degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1535 PWY0-1535]
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** Source: [[annotation-in-silico_annotation]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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*** Assignment: ec-number
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* [[TRYPDEG-PWY]], L-tryptophan degradation II (via pyruvate): [http://metacyc.org/META/NEW-IMAGE?object=TRYPDEG-PWY TRYPDEG-PWY]
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* Reaction: [[NAG1P-URIDYLTRANS-RXN]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-3661]], glycine betaine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3661 PWY-3661]
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*** Assignment: ec-number
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** '''4''' reactions found over '''7''' reactions in the full pathway
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* Reaction: [[UTPHEXPURIDYLYLTRANS-RXN]]
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* [[SERDEG-PWY]], L-serine degradation: [http://metacyc.org/META/NEW-IMAGE?object=SERDEG-PWY SERDEG-PWY]
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** Source: [[annotation-in-silico_annotation]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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*** Assignment: ec-number
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* [[PWY-5497]], purine nucleobases degradation II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5497 PWY-5497]
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== Pathways associated ==
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** '''7''' reactions found over '''24''' reactions in the full pathway
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* [[UDPNACETYLGALSYN-PWY]]
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* [[LCYSDEG-PWY]], L-cysteine degradation II: [http://metacyc.org/META/NEW-IMAGE?object=LCYSDEG-PWY LCYSDEG-PWY]
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* [[PWY-7238]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY0-1261]]
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== Reconstruction information  ==
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* [[UDPNAGSYN-PWY]]
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* [[annotation]]:
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* [[PWY-7343]]
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** [[pathwaytools]]:
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* [[PWY-3801]]
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*** [[experimental_annotation]]
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* [[PWY-3821]]
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*** [[in-silico_annotation]]
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* [[PWY-7817]]
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* [[PWY-5514]]
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* [[PWY-6527]]
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* [[PWY-4841]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=6768}}
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{{#set: in pathway=PWY0-1535|TRYPDEG-PWY|PWY-3661|SERDEG-PWY|PWY-5497|LCYSDEG-PWY}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: reconstruction category=annotation}}
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{{#set: left end position=1597}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: centisome position=13.085874    }}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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{{#set: reaction associated=2.7.7.11-RXN|2.7.7.44-RXN|GLUC1PURIDYLTRANS-RXN|NAG1P-URIDYLTRANS-RXN|UTPHEXPURIDYLYLTRANS-RXN}}
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{{#set: pathway associated=UDPNACETYLGALSYN-PWY|PWY-7238|PWY0-1261|UDPNAGSYN-PWY|PWY-7343|PWY-3801|PWY-3821|PWY-7817|PWY-5514|PWY-6527|PWY-4841}}

Latest revision as of 20:07, 21 March 2018

Gene Tiso_gene_6458

  • right end position:
    • 6768
  • transcription direction:
    • POSITIVE
  • left end position:
    • 1597
  • centisome position:
    • 13.085874
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_6458&oldid=46054"