Difference between revisions of "1.8.4.8-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-163 RXN1F-163] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.8.4.8-RXN 1.8.4.8-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-163 RXN1F-163] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.8.4.8-RXN 1.8.4.8-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.14.11 EC-1.14.11]
+
** [http://enzyme.expasy.org/EC/1.8.4.8 EC-1.8.4.8]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD1F-97]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[CPD1F-120]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[SUC]][c]
+
** 1 [[SO3]][c] '''+''' 1 [[Ox-Thioredoxin]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[3-5-ADP]][c] '''<=>''' 1 [[Red-Thioredoxin]][c] '''+''' 1 [[PAPS]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 2-oxoglutarate[c] '''+''' 1 oxygen[c] '''+''' 1 gibberellin A15 (open lactone form)[c] '''=>''' 1 H2O[c] '''+''' 1 gibberellin A24[c] '''+''' 1 CO2[c] '''+''' 1 succinate[c]
+
** 1 sulfite[c] '''+''' 1 an oxidized thioredoxin[c] '''+''' 2 H+[c] '''+''' 1 adenosine 3',5'-bisphosphate[c] '''<=>''' 1 a reduced thioredoxin[c] '''+''' 1 3'-phosphoadenylyl-sulfate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_3330]]
+
* Gene: [[Tiso_gene_15770]]
−
** [[pantograph]]-[[athaliana]]
+
** Source: [[orthology-synechocystis]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5070]], gibberellin biosynthesis I (non C-3, non C-13 hydroxylation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5070 PWY-5070]
+
* [[SO4ASSIM-PWY]], sulfate reduction I (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=SO4ASSIM-PWY SO4ASSIM-PWY]
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-synechocystis]]
−
*** [[athaliana]]
+
*** Tool: [[pantograph]]
−
*** [[esiliculosus]]
+
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11724 11724]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R06323 R06323]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02021 R02021]
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* UNIPROT:
−
{{#set: ec number=EC-1.14.11}}
+
** [http://www.uniprot.org/uniprot/P17853 P17853]
−
{{#set: gene associated=Tiso_gene_3330}}
+
** [http://www.uniprot.org/uniprot/P94498 P94498]
−
{{#set: in pathway=PWY-5070}}
+
** [http://www.uniprot.org/uniprot/P17854 P17854]
 +
** [http://www.uniprot.org/uniprot/Q55309 Q55309]
 +
** [http://www.uniprot.org/uniprot/P52672 P52672]
 +
** [http://www.uniprot.org/uniprot/P18408 P18408]
 +
** [http://www.uniprot.org/uniprot/Q10270 Q10270]
 +
** [http://www.uniprot.org/uniprot/P72794 P72794]
 +
** [http://www.uniprot.org/uniprot/Q39619 Q39619]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: ec number=EC-1.8.4.8}}
 +
{{#set: gene associated=Tiso_gene_15770}}
 +
{{#set: in pathway=SO4ASSIM-PWY}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-synechocystis|orthology-esiliculosus}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=athaliana|esiliculosus}}
 

Latest revision as of 20:07, 21 March 2018

Reaction 1.8.4.8-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 sulfite[c] + 1 an oxidized thioredoxin[c] + 2 H+[c] + 1 adenosine 3',5'-bisphosphate[c] <=> 1 a reduced thioredoxin[c] + 1 3'-phosphoadenylyl-sulfate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




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