Difference between revisions of "CHORISMATEMUT-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHEAMINOTRANS-RXN PHEAMINOTRANS-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.e...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHORISMATEMUT-RXN CHORISMATEMUT-RXN] == * direction: ** REVERSIBLE * common name: ** bifunctional_c...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHEAMINOTRANS-RXN PHEAMINOTRANS-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHORISMATEMUT-RXN CHORISMATEMUT-RXN] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 +
* common name:
 +
** bifunctional_chorismate_mutase_prephenate_dehydratase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.6.1.57 EC-2.6.1.57]
+
** [http://enzyme.expasy.org/EC/5.4.99.5 EC-5.4.99.5]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[GLT]][c] '''+''' 1 [[PHENYL-PYRUVATE]][c] '''<=>''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[PHE]][c]
+
** 1 [[CHORISMATE]][c] '''<=>''' 1 [[PREPHENATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 L-glutamate[c] '''+''' 1 2-oxo-3-phenylpropanoate[c] '''<=>''' 1 2-oxoglutarate[c] '''+''' 1 L-phenylalanine[c]
+
** 1 chorismate[c] '''<=>''' 1 prephenate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_10680]]
+
* Gene: [[Tiso_gene_5940]]
−
** [[pantograph]]-[[athaliana]]
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[synechocystis]]
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[orthology-athaliana]]
−
** [[pantograph]]-[[creinhardtii]]
+
** Source: [[orthology-esiliculosus]]
−
** [[pantograph]]-[[creinhardtii]]
+
** Source: [[orthology-creinhardtii]]
−
** [[pantograph]]-[[creinhardtii]]
+
−
* [[Tiso_gene_13538]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_17809]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
* [[Tiso_gene_17718]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
−
* [[Tiso_gene_13892]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_15680]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_6815]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[synechocystis]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5079]], L-phenylalanine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5079 PWY-5079]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7432]], L-phenylalanine biosynthesis III (cytosolic, plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7432 PWY-7432]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[ANAPHENOXI-PWY]], L-phenylalanine degradation II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=ANAPHENOXI-PWY ANAPHENOXI-PWY]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
 
* [[PHESYN]], L-phenylalanine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PHESYN PHESYN]
 
* [[PHESYN]], L-phenylalanine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PHESYN PHESYN]
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6120]], L-tyrosine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6120 PWY-6120]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-3462]], L-phenylalanine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3462 PWY-3462]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-3461]], L-tyrosine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3461 PWY-3461]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7626]], bacilysin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7626 PWY-7626]
 +
** '''1''' reactions found over '''10''' reactions in the full pathway
 +
* [[TYRSYN]], L-tyrosine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=TYRSYN TYRSYN]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6627]], salinosporamide A biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6627 PWY-6627]
 +
** '''1''' reactions found over '''15''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-athaliana]]
−
*** [[creinhardtii]]
+
*** Tool: [[pantograph]]
−
*** [[synechocystis]]
+
** Source: [[orthology-creinhardtii]]
−
*** [[athaliana]]
+
*** Tool: [[pantograph]]
−
*** [[esiliculosus]]
+
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25152 25152]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13897 13897]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00694 R00694]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01715 R01715]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/O84642 O84642]
+
** [http://www.uniprot.org/uniprot/P19080 P19080]
−
** [http://www.uniprot.org/uniprot/Q02636 Q02636]
+
** [http://www.uniprot.org/uniprot/P27603 P27603]
−
** [http://www.uniprot.org/uniprot/Q9Z7G5 Q9Z7G5]
+
** [http://www.uniprot.org/uniprot/P32178 P32178]
−
** [http://www.uniprot.org/uniprot/Q9V0L2 Q9V0L2]
+
** [http://www.uniprot.org/uniprot/P43900 P43900]
−
** [http://www.uniprot.org/uniprot/Q9PHA8 Q9PHA8]
+
** [http://www.uniprot.org/uniprot/Q9RQV7 Q9RQV7]
−
** [http://www.uniprot.org/uniprot/O59096 O59096]
+
** [http://www.uniprot.org/uniprot/P21204 P21204]
−
** [http://www.uniprot.org/uniprot/O58489 O58489]
+
** [http://www.uniprot.org/uniprot/Q58029 Q58029]
−
** [http://www.uniprot.org/uniprot/Q9UZ63 Q9UZ63]
+
** [http://www.uniprot.org/uniprot/Q57696 Q57696]
−
** [http://www.uniprot.org/uniprot/Q9JT83 Q9JT83]
+
** [http://www.uniprot.org/uniprot/P43902 P43902]
−
** [http://www.uniprot.org/uniprot/Q9JYA1 Q9JYA1]
+
** [http://www.uniprot.org/uniprot/Q9PII3 Q9PII3]
−
** [http://www.uniprot.org/uniprot/P95468 P95468]
+
** [http://www.uniprot.org/uniprot/P0A9J8 P0A9J8]
−
** [http://www.uniprot.org/uniprot/Q9UWK9 Q9UWK9]
+
** [http://www.uniprot.org/uniprot/P07023 P07023]
−
** [http://www.uniprot.org/uniprot/Q9UWK8 Q9UWK8]
+
** [http://www.uniprot.org/uniprot/Q02286 Q02286]
−
** [http://www.uniprot.org/uniprot/P74861 P74861]
+
** [http://www.uniprot.org/uniprot/Q02287 Q02287]
−
** [http://www.uniprot.org/uniprot/P04693 P04693]
+
** [http://www.uniprot.org/uniprot/P42738 P42738]
 +
** [http://www.uniprot.org/uniprot/O22409 O22409]
 +
** [http://www.uniprot.org/uniprot/O22410 O22410]
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: ec number=EC-2.6.1.57}}
+
{{#set: common name=bifunctional_chorismate_mutase_prephenate_dehydratase}}
−
{{#set: gene associated=Tiso_gene_10680|Tiso_gene_13538|Tiso_gene_17809|Tiso_gene_17718|Tiso_gene_13892|Tiso_gene_15680|Tiso_gene_6815}}
+
{{#set: ec number=EC-5.4.99.5}}
−
{{#set: in pathway=PWY-5079|PWY-7432|ANAPHENOXI-PWY|PHESYN}}
+
{{#set: gene associated=Tiso_gene_5940}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: in pathway=PHESYN|PWY-6120|PWY-3462|PWY-3461|PWY-7626|TYRSYN|PWY-6627}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction category=orthology|manual|annotation}}
−
{{#set: reconstruction source=creinhardtii|synechocystis|athaliana|esiliculosus}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|manual-primary_network|orthology-creinhardtii|orthology-athaliana|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:07, 21 March 2018

Reaction CHORISMATEMUT-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • bifunctional_chorismate_mutase_prephenate_dehydratase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 chorismate[c] <=> 1 prephenate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PHESYN, L-phenylalanine biosynthesis I: PHESYN
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6120, L-tyrosine biosynthesis III: PWY-6120
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-3462, L-phenylalanine biosynthesis II: PWY-3462
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-3461, L-tyrosine biosynthesis II: PWY-3461
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-7626, bacilysin biosynthesis: PWY-7626
    • 1 reactions found over 10 reactions in the full pathway
  • TYRSYN, L-tyrosine biosynthesis I: TYRSYN
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6627, salinosporamide A biosynthesis: PWY-6627
    • 1 reactions found over 15 reactions in the full pathway

Reconstruction information

External links





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