Difference between revisions of "Tiso gene 14278"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-308 RXN0-308] == * direction: ** LEFT-TO-RIGHT * common name: ** cysteine_mitochondrial ** cys...")
(Created page with "Category:Gene == Gene Tiso_gene_14278 == * right end position: ** 4477 * transcription direction: ** POSITIVE * left end position: ** 153 * centisome position: ** 2.664576...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-308 RXN0-308] ==
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== Gene Tiso_gene_14278 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 4477
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* common name:
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* transcription direction:
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** cysteine_mitochondrial
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** POSITIVE
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** cysteine_desulfurase_for_iron-sulfur_cluster_formation_suf
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* left end position:
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* ec number:
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** 153
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** [http://enzyme.expasy.org/EC/2.8.1.7 EC-2.8.1.7]
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* centisome position:
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** 2.6645768   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ENTDB-RXN]]
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** 1 [[CYS]][c] '''+''' 1 [[Cysteine-Desulfurase-L-cysteine]][c] '''=>''' 1 [[L-ALPHA-ALANINE]][c] '''+''' 1 [[L-Cysteine-Desulfurase-persulfide]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 L-cysteine[c] '''+''' 1 an [L-cysteine desulfurase]-L-cysteine[c] '''=>''' 1 L-alanine[c] '''+''' 1 an [L-cysteine desulfurase] L-cysteine persulfide[c]
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* Reaction: [[HOLO-ACP-SYNTH-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-10994]]
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* [[Tiso_gene_11478]]
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** Source: [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** Assignment: ec-number
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***EC-NUMBER
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* Reaction: [[RXN-15889]]
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** EXPERIMENTAL_ANNOTATION
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** Source: [[annotation-in-silico_annotation]]
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***EC-NUMBER
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*** Assignment: ec-number
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** [[pantograph]]-[[esiliculosus]]
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* Reaction: [[RXN-16759]]
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* [[Tiso_gene_4284]]
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** Source: [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** Assignment: ec-number
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***EC-NUMBER
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== Pathways associated ==
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** EXPERIMENTAL_ANNOTATION
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* [[ENTBACSYN-PWY]]
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***EC-NUMBER
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* [[PWY-6012-1]]
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** [[pantograph]]-[[esiliculosus]]
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* [[PWY-6012]]
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* [[Tiso_gene_14710]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY0-1021]], L-alanine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1021 PWY0-1021]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[PWY-6892]], thiazole biosynthesis I (facultative anaerobic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6892 PWY-6892]
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** '''3''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-6891]], thiazole biosynthesis II (aerobic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6891 PWY-6891]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-6823]], molybdenum cofactor biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6823 PWY-6823]
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** '''3''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=4477}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07460 R07460]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=153}}
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{{#set: common name=cysteine_mitochondrial}}
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{{#set: centisome position=2.6645768    }}
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{{#set: common name=cysteine_desulfurase_for_iron-sulfur_cluster_formation_suf}}
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{{#set: reaction associated=ENTDB-RXN|HOLO-ACP-SYNTH-RXN|RXN-10994|RXN-15889|RXN-16759}}
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{{#set: ec number=EC-2.8.1.7}}
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{{#set: pathway associated=ENTBACSYN-PWY|PWY-6012-1|PWY-6012}}
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{{#set: gene associated=Tiso_gene_11478|Tiso_gene_4284|Tiso_gene_14710}}
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{{#set: in pathway=PWY0-1021|PWY-6892|PWY-6891|PWY-6823}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 21:07, 21 March 2018

Gene Tiso_gene_14278

  • right end position:
    • 4477
  • transcription direction:
    • POSITIVE
  • left end position:
    • 153
  • centisome position:
    • 2.6645768
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_14278&oldid=46114"