Difference between revisions of "RXN-5462"

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(Created page with "Category:Gene == Gene Tiso_gene_15680 == * Synonym(s): == Reactions associated == * 2.6.1.7-RXN ** pantograph-esiliculosus * ASPAMINOTRANS-RXN ** pantog...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5462 RXN-5462] == * direction: ** LEFT-TO-RIGHT * common name: ** vacuolar_protein_sorting-asso...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_15680 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5462 RXN-5462] ==
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* direction:
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** LEFT-TO-RIGHT
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* common name:
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** vacuolar_protein_sorting-associated_protein_51_homolog
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** ORF
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* ec number:
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** [http://enzyme.expasy.org/EC/2.4.1.132 EC-2.4.1.132]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[2.6.1.7-RXN]]
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* With identifiers:
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** [[pantograph]]-[[esiliculosus]]
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** 1 [[GDP-MANNOSE]][c] '''+''' 1 [[ALPHA-D-MANNOSYLCHITOBIO]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[GDP]][c] '''+''' 1 [[CPD-5161]][c]
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* [[ASPAMINOTRANS-RXN]]
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* With common name(s):
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** [[pantograph]]-[[esiliculosus]]
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** 1 GDP-α-D-mannose[c] '''+''' 1 β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] '''=>''' 1 H+[c] '''+''' 1 GDP[c] '''+''' 1 α-D-Man-(1→3)-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c]
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* [[PHEAMINOTRANS-RXN]]
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** [[pantograph]]-[[athaliana]]
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== Genes associated with this reaction  ==
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** [[pantograph]]-[[esiliculosus]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-10721]]
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* Gene: [[Tiso_gene_16872]]
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** [[pantograph]]-[[esiliculosus]]
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** Source: [[annotation-in-silico_annotation]]
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* [[RXN-10814]]
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*** Assignment: EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* Gene: [[Tiso_gene_10734]]
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* [[RXN-11737]]
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** Source: [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[esiliculosus]]
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*** Assignment: EC-NUMBER
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* [[RXN-13697]]
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** Source: [[orthology-esiliculosus]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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== Pathways associated ==
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* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic, high mannose): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
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* [[PWY-5913]]
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** '''19''' reactions found over '''19''' reactions in the full pathway
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* [[MALATE-ASPARTATE-SHUTTLE-PWY]]
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== Reconstruction information  ==
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* [[PHESYN]]
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* Category: [[orthology]]
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* [[PWY-6318]]
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** Source: [[orthology-esiliculosus]]
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* [[PWY-7383]]
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*** Tool: [[pantograph]]
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* [[ASPARTATESYN-PWY]]
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* Category: [[annotation]]
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* [[PWY-6643]]
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-6642]]
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*** Tool: [[pathwaytools]]
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* [[PWY-6638]]
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* [[ASPARTATE-DEG1-PWY]]
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* [[PWY-7432]]
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* [[PWY-6309]]
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* [[GLUTDEG-PWY]]
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* [[PWY-7115]]
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* [[PWY-5079]]
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* [[ASPARAGINE-DEG1-PWY-1]]
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−
* [[ANAPHENOXI-PWY]]
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* [[PWY-7117]]
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== External links  ==
 
== External links  ==
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{{#set: reaction associated=2.6.1.7-RXN|ASPAMINOTRANS-RXN|PHEAMINOTRANS-RXN|RXN-10721|RXN-10814|RXN-11737|RXN-13697}}
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* RHEA:
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{{#set: pathway associated=PWY-5913|MALATE-ASPARTATE-SHUTTLE-PWY|PHESYN|PWY-6318|PWY-7383|ASPARTATESYN-PWY|PWY-6643|PWY-6642|PWY-6638|ASPARTATE-DEG1-PWY|PWY-7432|PWY-6309|GLUTDEG-PWY|PWY-7115|PWY-5079|ASPARAGINE-DEG1-PWY-1|ANAPHENOXI-PWY|PWY-7117}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29518 29518]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R05973 R05973]
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** [http://www.genome.jp/dbget-bin/www_bget?R05002 R05002]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=vacuolar_protein_sorting-associated_protein_51_homolog}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-2.4.1.132}}
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{{#set: gene associated=Tiso_gene_16872|Tiso_gene_10734}}
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{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 21:08, 21 March 2018

Reaction RXN-5462

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • vacuolar_protein_sorting-associated_protein_51_homolog
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 GDP-α-D-mannose[c] + 1 β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] => 1 H+[c] + 1 GDP[c] + 1 α-D-Man-(1→3)-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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