Difference between revisions of "CPD-3617"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN490-3641 RXN490-3641] == * direction: ** LEFT-TO-RIGHT * common name: ** proline,2-oxoglutarate-...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-3617 CPD-3617] == * smiles: ** CCCCCCCCCC(=O)[O-] * common name: ** decanoate * inchi key:...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN490-3641 RXN490-3641] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-3617 CPD-3617] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CCCCCCCCCC(=O)[O-]
 
* common name:
 
* common name:
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** proline,2-oxoglutarate-4-dioxygenase (cis-4-hydroxy-L-proline)
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** decanoate
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* ec number:
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* inchi key:
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** [http://enzyme.expasy.org/EC/1.14.11 EC-1.14.11]
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** InChIKey=GHVNFZFCNZKVNT-UHFFFAOYSA-M
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* molecular weight:
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** 171.259   
 
* Synonym(s):
 
* Synonym(s):
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** prolyl hydroxylase
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** caprate
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** prolyl 4-hydroxylase
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** decanoic acid
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** proline,2-oxoglutarate 4-dioxygenase
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** n-decanoate
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** proline hydroxylase
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** n-capric acid
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** protocollagen hydroxylase
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** caprinic acid
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** caprinate
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN-13614]]
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** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PRO]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''=>''' 1 [[4-HYDROXY-L-PROLINE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[SUC]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 oxygen[c] '''+''' 1 L-proline[c] '''+''' 1 2-oxoglutarate[c] '''=>''' 1 trans-4-hydroxy-L-proline[c] '''+''' 1 CO2[c] '''+''' 1 succinate[c]
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−
 
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_2158]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_17593]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_18145]]
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** [[pantograph]]-[[esiliculosus]]
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−
* [[Tiso_gene_18933]]
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** [[pantograph]]-[[esiliculosus]]
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−
* [[Tiso_gene_6296]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_2280]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_19638]]
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** [[pantograph]]-[[esiliculosus]]
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−
* [[Tiso_gene_18208]]
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** [[pantograph]]-[[esiliculosus]]
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−
* [[Tiso_gene_292]]
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−
** [[pantograph]]-[[esiliculosus]]
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−
* [[Tiso_gene_9873]]
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** [[pantograph]]-[[esiliculosus]]
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−
* [[Tiso_gene_18235]]
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** [[pantograph]]-[[esiliculosus]]
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−
* [[Tiso_gene_1468]]
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** [[pantograph]]-[[esiliculosus]]
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−
* [[Tiso_gene_15594]]
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** [[pantograph]]-[[esiliculosus]]
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−
* [[Tiso_gene_9035]]
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** [[pantograph]]-[[esiliculosus]]
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−
* [[Tiso_gene_15328]]
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** [[pantograph]]-[[esiliculosus]]
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−
* [[Tiso_gene_16842]]
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** [[pantograph]]-[[esiliculosus]]
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−
* [[Tiso_gene_3021]]
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** [[pantograph]]-[[esiliculosus]]
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−
* [[Tiso_gene_9227]]
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** [[pantograph]]-[[esiliculosus]]
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−
* [[Tiso_gene_16122]]
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** [[pantograph]]-[[esiliculosus]]
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−
* [[Tiso_gene_17919]]
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** [[pantograph]]-[[esiliculosus]]
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−
* [[Tiso_gene_17823]]
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** [[pantograph]]-[[esiliculosus]]
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−
* [[Tiso_gene_18689]]
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** [[pantograph]]-[[esiliculosus]]
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−
* [[Tiso_gene_8652]]
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** [[pantograph]]-[[esiliculosus]]
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−
* [[Tiso_gene_9455]]
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−
** [[pantograph]]-[[esiliculosus]]
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−
* [[Tiso_gene_9165]]
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** [[pantograph]]-[[esiliculosus]]
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−
* [[Tiso_gene_9636]]
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** [[pantograph]]-[[esiliculosus]]
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−
* [[Tiso_gene_13008]]
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** [[pantograph]]-[[athaliana]]
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−
** [[pantograph]]-[[creinhardtii]]
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−
== Pathways  ==
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−
== Reconstruction information  ==
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* [[orthology]]:
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−
** [[pantograph]]:
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*** [[creinhardtii]]
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*** [[athaliana]]
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*** [[esiliculosus]]
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−
* [[manual]]:
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** [[primary_network]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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* CAS : 334-48-5
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** [http://www.genome.jp/dbget-bin/www_bget?R01252 R01252]
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* BIGG : dca
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{{#set: direction=LEFT-TO-RIGHT}}
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* PUBCHEM:
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{{#set: common name=proline,2-oxoglutarate-4-dioxygenase (cis-4-hydroxy-L-proline)}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=4678093 4678093]
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{{#set: ec number=EC-1.14.11}}
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* HMDB : HMDB00511
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{{#set: common name=prolyl hydroxylase|prolyl 4-hydroxylase|proline,2-oxoglutarate 4-dioxygenase|proline hydroxylase|protocollagen hydroxylase}}
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* LIGAND-CPD:
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{{#set: gene associated=Tiso_gene_2158|Tiso_gene_17593|Tiso_gene_18145|Tiso_gene_18933|Tiso_gene_6296|Tiso_gene_2280|Tiso_gene_19638|Tiso_gene_18208|Tiso_gene_292|Tiso_gene_9873|Tiso_gene_18235|Tiso_gene_1468|Tiso_gene_15594|Tiso_gene_9035|Tiso_gene_15328|Tiso_gene_16842|Tiso_gene_3021|Tiso_gene_9227|Tiso_gene_16122|Tiso_gene_17919|Tiso_gene_17823|Tiso_gene_18689|Tiso_gene_8652|Tiso_gene_9455|Tiso_gene_9165|Tiso_gene_9636|Tiso_gene_13008}}
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** [http://www.genome.jp/dbget-bin/www_bget?C01571 C01571]
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{{#set: in pathway=}}
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* CHEMSPIDER:
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{{#set: reconstruction category=orthology}}
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** [http://www.chemspider.com/Chemical-Structure.3866366.html 3866366]
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{{#set: reconstruction tool=pantograph}}
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* CHEBI:
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{{#set: reconstruction source=creinhardtii|athaliana|esiliculosus}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=27689 27689]
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{{#set: reconstruction category=manual}}
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* METABOLIGHTS : MTBLC27689
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{{#set: reconstruction source=primary_network}}
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{{#set: smiles=CCCCCCCCCC(=O)[O-]}}
 +
{{#set: common name=decanoate}}
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{{#set: inchi key=InChIKey=GHVNFZFCNZKVNT-UHFFFAOYSA-M}}
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{{#set: molecular weight=171.259    }}
 +
{{#set: common name=caprate|decanoic acid|n-decanoate|n-capric acid|caprinic acid|caprinate}}
 +
{{#set: consumed by=RXN-13614}}

Latest revision as of 20:08, 21 March 2018

Metabolite CPD-3617

  • smiles:
    • CCCCCCCCCC(=O)[O-]
  • common name:
    • decanoate
  • inchi key:
    • InChIKey=GHVNFZFCNZKVNT-UHFFFAOYSA-M
  • molecular weight:
    • 171.259
  • Synonym(s):
    • caprate
    • decanoic acid
    • n-decanoate
    • n-capric acid
    • caprinic acid
    • caprinate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 334-48-5
  • BIGG : dca
  • PUBCHEM:
  • HMDB : HMDB00511
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC27689
"CCCCCCCCCC(=O)[O-" cannot be used as a page name in this wiki.



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