Difference between revisions of "MALATE-DEH-RXN"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_2105 == * left end position: ** 18554 * transcription direction: ** POSITIVE * right end position: ** 20045 * centisome position: ** 61.372...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MALATE-DEH-RXN MALATE-DEH-RXN] == * direction: ** REVERSIBLE * common name: ** malate_dehydrogenase...") |
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− | [[Category: | + | [[Category:Reaction]] |
− | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MALATE-DEH-RXN MALATE-DEH-RXN] == |
− | * | + | * direction: |
− | + | ** REVERSIBLE | |
− | + | * common name: | |
− | ** | + | ** malate_dehydrogenase_mitochondrial |
− | * | + | * ec number: |
− | ** | + | ** [http://enzyme.expasy.org/EC/1.1.1.37 EC-1.1.1.37] |
− | * | + | |
− | ** | + | |
* Synonym(s): | * Synonym(s): | ||
+ | ** malate dehydrogenation | ||
− | == | + | == Reaction Formula == |
− | * [[ | + | * With identifiers: |
− | ** | + | ** 1 [[MAL]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[OXALACETIC_ACID]][c] '''+''' 1 [[NADH]][c] |
− | *** | + | * With common name(s): |
− | == Pathways | + | ** 1 (S)-malate[c] '''+''' 1 NAD+[c] '''<=>''' 1 H+[c] '''+''' 1 oxaloacetate[c] '''+''' 1 NADH[c] |
− | * [[PWY- | + | |
+ | == Genes associated with this reaction == | ||
+ | Genes have been associated with this reaction based on different elements listed below. | ||
+ | * Gene: [[Tiso_gene_2323]] | ||
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Assignment: EC-NUMBER | ||
+ | ** Source: [[annotation-experimental_annotation]] | ||
+ | *** Assignment: EC-NUMBER | ||
+ | ** Source: [[orthology-athaliana]] | ||
+ | ** Source: [[orthology-athaliana]] | ||
+ | ** Source: [[orthology-athaliana]] | ||
+ | ** Source: [[orthology-athaliana]] | ||
+ | ** Source: [[orthology-synechocystis]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | ** Source: [[orthology-creinhardtii]] | ||
+ | * Gene: [[Tiso_gene_1990]] | ||
+ | ** Source: [[orthology-athaliana]] | ||
+ | ** Source: [[orthology-athaliana]] | ||
+ | ** Source: [[orthology-athaliana]] | ||
+ | ** Source: [[orthology-athaliana]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | ** Source: [[orthology-creinhardtii]] | ||
+ | == Pathways == | ||
+ | * [[PWY-561]], superpathway of glyoxylate cycle and fatty acid degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-561 PWY-561] | ||
+ | ** '''5''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[PWY-5913]], partial TCA cycle (obligate autotrophs): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5913 PWY-5913] | ||
+ | ** '''9''' reactions found over '''11''' reactions in the full pathway | ||
+ | * [[PWY-1622]], formaldehyde assimilation I (serine pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1622 PWY-1622] | ||
+ | ** '''5''' reactions found over '''13''' reactions in the full pathway | ||
+ | * [[PWY66-399]], gluconeogenesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-399 PWY66-399] | ||
+ | ** '''10''' reactions found over '''12''' reactions in the full pathway | ||
+ | * [[P42-PWY]], incomplete reductive TCA cycle: [http://metacyc.org/META/NEW-IMAGE?object=P42-PWY P42-PWY] | ||
+ | ** '''4''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY-7383]], anaerobic energy metabolism (invertebrates, cytosol): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7383 PWY-7383] | ||
+ | ** '''5''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY-5392]], reductive TCA cycle II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5392 PWY-5392] | ||
+ | ** '''5''' reactions found over '''12''' reactions in the full pathway | ||
+ | * [[TCA]], TCA cycle I (prokaryotic): [http://metacyc.org/META/NEW-IMAGE?object=TCA TCA] | ||
+ | ** '''7''' reactions found over '''10''' reactions in the full pathway | ||
+ | * [[P105-PWY]], TCA cycle IV (2-oxoglutarate decarboxylase): [http://metacyc.org/META/NEW-IMAGE?object=P105-PWY P105-PWY] | ||
+ | ** '''9''' reactions found over '''11''' reactions in the full pathway | ||
+ | * [[P23-PWY]], reductive TCA cycle I: [http://metacyc.org/META/NEW-IMAGE?object=P23-PWY P23-PWY] | ||
+ | ** '''7''' reactions found over '''12''' reactions in the full pathway | ||
+ | * [[PWY-5690]], TCA cycle II (plants and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5690 PWY-5690] | ||
+ | ** '''6''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[GLYOXYLATE-BYPASS]], glyoxylate cycle: [http://metacyc.org/META/NEW-IMAGE?object=GLYOXYLATE-BYPASS GLYOXYLATE-BYPASS] | ||
+ | ** '''6''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[FERMENTATION-PWY]], mixed acid fermentation: [http://metacyc.org/META/NEW-IMAGE?object=FERMENTATION-PWY FERMENTATION-PWY] | ||
+ | ** '''9''' reactions found over '''16''' reactions in the full pathway | ||
+ | * [[PWY-6728]], methylaspartate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6728 PWY-6728] | ||
+ | ** '''11''' reactions found over '''18''' reactions in the full pathway | ||
+ | * [[PWY-7115]], C4 photosynthetic carbon assimilation cycle, NAD-ME type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7115 PWY-7115] | ||
+ | ** '''7''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[GLUCONEO-PWY]], gluconeogenesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY] | ||
+ | ** '''13''' reactions found over '''13''' reactions in the full pathway | ||
+ | * [[P108-PWY]], pyruvate fermentation to propanoate I: [http://metacyc.org/META/NEW-IMAGE?object=P108-PWY P108-PWY] | ||
+ | ** '''3''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[MALATE-ASPARTATE-SHUTTLE-PWY]], L-aspartate degradation II: [http://metacyc.org/META/NEW-IMAGE?object=MALATE-ASPARTATE-SHUTTLE-PWY MALATE-ASPARTATE-SHUTTLE-PWY] | ||
+ | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY66-398]], TCA cycle III (animals): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-398 PWY66-398] | ||
+ | ** '''10''' reactions found over '''11''' reactions in the full pathway | ||
+ | * [[PWY-6969]], TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6969 PWY-6969] | ||
+ | ** '''9''' reactions found over '''12''' reactions in the full pathway | ||
+ | == Reconstruction information == | ||
+ | * Category: [[orthology]] | ||
+ | ** Source: [[orthology-athaliana]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | ** Source: [[orthology-creinhardtii]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | ** Source: [[orthology-synechocystis]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | * Category: [[manual]] | ||
+ | ** Source: [[manual-primary_network]] | ||
+ | * Category: [[annotation]] | ||
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Tool: [[pathwaytools]] | ||
+ | ** Source: [[annotation-experimental_annotation]] | ||
+ | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
− | {{#set: | + | * RHEA: |
− | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21432 21432] |
− | {{#set: | + | * PIR: |
− | {{#set: | + | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A32472 A32472] |
− | {{#set: | + | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A49496 A49496] |
− | {{#set: | + | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A60689 A60689] |
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=C64110 C64110] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=D81399 D81399] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=DEBYMC DEBYMC] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=DEBYMM DEBYMM] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=DEBYMP DEBYMP] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=DEEBM DEEBM] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=DEECM DEECM] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=DEMSMC DEMSMC] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=DEMSMM DEMSMM] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=DEPGMM DEPGMM] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=DEPUGW DEPUGW] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=DEPUMW DEPUMW] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=DERTMM DERTMM] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=DETWMA DETWMA] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=F85551 F85551] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=G01650 G01650] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=H64477 H64477] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=I40383 I40383] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=PA0040 PA0040] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=PA0079 PA0079] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=PN0162 PN0162] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S03352 S03352] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S03958 S03958] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S04956 S04956] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S04957 S04957] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S04958 S04958] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S04959 S04959] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S04960 S04960] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S04961 S04961] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S07574 S07574] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S08981 S08981] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S44167 S44167] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S52039 S52039] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S57958 S57958] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S61213 S61213] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S75735 S75735] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T03272 T03272] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T06325 T06325] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T06326 T06326] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T06327 T06327] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T06328 T06328] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T06386 T06386] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T08015 T08015] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T08077 T08077] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T08177 T08177] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T09228 T09228] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T09263 T09263] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T09286 T09286] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T09291 T09291] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T09294 T09294] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T12433 T12433] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T18570 T18570] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T45206 T45206] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T45208 T45208] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T49932 T49932] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T51311 T51311] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T51862 T51862] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R00342 R00342] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/Q07841 Q07841] | ||
+ | ** [http://www.uniprot.org/uniprot/P33163 P33163] | ||
+ | ** [http://www.uniprot.org/uniprot/P44427 P44427] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PHY2 Q9PHY2] | ||
+ | ** [http://www.uniprot.org/uniprot/P22133 P22133] | ||
+ | ** [http://www.uniprot.org/uniprot/P17505 P17505] | ||
+ | ** [http://www.uniprot.org/uniprot/P32419 P32419] | ||
+ | ** [http://www.uniprot.org/uniprot/P25077 P25077] | ||
+ | ** [http://www.uniprot.org/uniprot/P14152 P14152] | ||
+ | ** [http://www.uniprot.org/uniprot/Q8R1P0 Q8R1P0] | ||
+ | ** [http://www.uniprot.org/uniprot/P19446 P19446] | ||
+ | ** [http://www.uniprot.org/uniprot/P17783 P17783] | ||
+ | ** [http://www.uniprot.org/uniprot/P04636 P04636] | ||
+ | ** [http://www.uniprot.org/uniprot/P58408 P58408] | ||
+ | ** [http://www.uniprot.org/uniprot/Q58820 Q58820] | ||
+ | ** [http://www.uniprot.org/uniprot/P49814 P49814] | ||
+ | ** [http://www.uniprot.org/uniprot/Q93ZA7 Q93ZA7] | ||
+ | ** [http://www.uniprot.org/uniprot/Q7M4Y9 Q7M4Y9] | ||
+ | ** [http://www.uniprot.org/uniprot/Q7M4Z0 Q7M4Z0] | ||
+ | ** [http://www.uniprot.org/uniprot/P10887 P10887] | ||
+ | ** [http://www.uniprot.org/uniprot/P11386 P11386] | ||
+ | ** [http://www.uniprot.org/uniprot/P19983 P19983] | ||
+ | ** [http://www.uniprot.org/uniprot/P19981 P19981] | ||
+ | ** [http://www.uniprot.org/uniprot/P19979 P19979] | ||
+ | ** [http://www.uniprot.org/uniprot/P19977 P19977] | ||
+ | ** [http://www.uniprot.org/uniprot/P19982 P19982] | ||
+ | ** [http://www.uniprot.org/uniprot/P19978 P19978] | ||
+ | ** [http://www.uniprot.org/uniprot/P19980 P19980] | ||
+ | ** [http://www.uniprot.org/uniprot/P16142 P16142] | ||
+ | ** [http://www.uniprot.org/uniprot/P46487 P46487] | ||
+ | ** [http://www.uniprot.org/uniprot/P46488 P46488] | ||
+ | ** [http://www.uniprot.org/uniprot/Q43744 Q43744] | ||
+ | ** [http://www.uniprot.org/uniprot/Q59202 Q59202] | ||
+ | ** [http://www.uniprot.org/uniprot/Q55383 Q55383] | ||
+ | ** [http://www.uniprot.org/uniprot/Q42972 Q42972] | ||
+ | ** [http://www.uniprot.org/uniprot/O81278 O81278] | ||
+ | ** [http://www.uniprot.org/uniprot/O81279 O81279] | ||
+ | ** [http://www.uniprot.org/uniprot/O65363 O65363] | ||
+ | ** [http://www.uniprot.org/uniprot/O65364 O65364] | ||
+ | ** [http://www.uniprot.org/uniprot/O81609 O81609] | ||
+ | ** [http://www.uniprot.org/uniprot/Q43743 Q43743] | ||
+ | ** [http://www.uniprot.org/uniprot/Q42686 Q42686] | ||
+ | ** [http://www.uniprot.org/uniprot/P93106 P93106] | ||
+ | ** [http://www.uniprot.org/uniprot/Q04820 Q04820] | ||
+ | ** [http://www.uniprot.org/uniprot/O48903 O48903] | ||
+ | ** [http://www.uniprot.org/uniprot/O48904 O48904] | ||
+ | ** [http://www.uniprot.org/uniprot/O48905 O48905] | ||
+ | ** [http://www.uniprot.org/uniprot/O48906 O48906] | ||
+ | ** [http://www.uniprot.org/uniprot/O24047 O24047] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9XTB4 Q9XTB4] | ||
+ | ** [http://www.uniprot.org/uniprot/P50917 P50917] | ||
+ | ** [http://www.uniprot.org/uniprot/Q49981 Q49981] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZP05 Q9ZP05] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZP06 Q9ZP06] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9SN86 Q9SN86] | ||
+ | {{#set: direction=REVERSIBLE}} | ||
+ | {{#set: common name=malate_dehydrogenase_mitochondrial}} | ||
+ | {{#set: ec number=EC-1.1.1.37}} | ||
+ | {{#set: common name=malate dehydrogenation}} | ||
+ | {{#set: gene associated=Tiso_gene_2323|Tiso_gene_1990}} | ||
+ | {{#set: in pathway=PWY-561|PWY-5913|PWY-1622|PWY66-399|P42-PWY|PWY-7383|PWY-5392|TCA|P105-PWY|P23-PWY|PWY-5690|GLYOXYLATE-BYPASS|FERMENTATION-PWY|PWY-6728|PWY-7115|GLUCONEO-PWY|P108-PWY|MALATE-ASPARTATE-SHUTTLE-PWY|PWY66-398|PWY-6969}} | ||
+ | {{#set: reconstruction category=orthology|manual|annotation}} | ||
+ | {{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}} | ||
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Latest revision as of 20:08, 21 March 2018
Contents
Reaction MALATE-DEH-RXN
- direction:
- REVERSIBLE
- common name:
- malate_dehydrogenase_mitochondrial
- ec number:
- Synonym(s):
- malate dehydrogenation
Reaction Formula
- With identifiers:
- 1 MAL[c] + 1 NAD[c] <=> 1 PROTON[c] + 1 OXALACETIC_ACID[c] + 1 NADH[c]
- With common name(s):
- 1 (S)-malate[c] + 1 NAD+[c] <=> 1 H+[c] + 1 oxaloacetate[c] + 1 NADH[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_2323
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-experimental_annotation
- Assignment: EC-NUMBER
- Source: orthology-athaliana
- Source: orthology-athaliana
- Source: orthology-athaliana
- Source: orthology-athaliana
- Source: orthology-synechocystis
- Source: orthology-esiliculosus
- Source: orthology-creinhardtii
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_1990
- Source: orthology-athaliana
- Source: orthology-athaliana
- Source: orthology-athaliana
- Source: orthology-athaliana
- Source: orthology-esiliculosus
- Source: orthology-creinhardtii
Pathways
- PWY-561, superpathway of glyoxylate cycle and fatty acid degradation: PWY-561
- 5 reactions found over 8 reactions in the full pathway
- PWY-5913, partial TCA cycle (obligate autotrophs): PWY-5913
- 9 reactions found over 11 reactions in the full pathway
- PWY-1622, formaldehyde assimilation I (serine pathway): PWY-1622
- 5 reactions found over 13 reactions in the full pathway
- PWY66-399, gluconeogenesis III: PWY66-399
- 10 reactions found over 12 reactions in the full pathway
- P42-PWY, incomplete reductive TCA cycle: P42-PWY
- 4 reactions found over 7 reactions in the full pathway
- PWY-7383, anaerobic energy metabolism (invertebrates, cytosol): PWY-7383
- 5 reactions found over 7 reactions in the full pathway
- PWY-5392, reductive TCA cycle II: PWY-5392
- 5 reactions found over 12 reactions in the full pathway
- TCA, TCA cycle I (prokaryotic): TCA
- 7 reactions found over 10 reactions in the full pathway
- P105-PWY, TCA cycle IV (2-oxoglutarate decarboxylase): P105-PWY
- 9 reactions found over 11 reactions in the full pathway
- P23-PWY, reductive TCA cycle I: P23-PWY
- 7 reactions found over 12 reactions in the full pathway
- PWY-5690, TCA cycle II (plants and fungi): PWY-5690
- 6 reactions found over 9 reactions in the full pathway
- GLYOXYLATE-BYPASS, glyoxylate cycle: GLYOXYLATE-BYPASS
- 6 reactions found over 6 reactions in the full pathway
- FERMENTATION-PWY, mixed acid fermentation: FERMENTATION-PWY
- 9 reactions found over 16 reactions in the full pathway
- PWY-6728, methylaspartate cycle: PWY-6728
- 11 reactions found over 18 reactions in the full pathway
- PWY-7115, C4 photosynthetic carbon assimilation cycle, NAD-ME type: PWY-7115
- 7 reactions found over 9 reactions in the full pathway
- GLUCONEO-PWY, gluconeogenesis I: GLUCONEO-PWY
- 13 reactions found over 13 reactions in the full pathway
- P108-PWY, pyruvate fermentation to propanoate I: P108-PWY
- 3 reactions found over 7 reactions in the full pathway
- MALATE-ASPARTATE-SHUTTLE-PWY, L-aspartate degradation II: MALATE-ASPARTATE-SHUTTLE-PWY
- 2 reactions found over 2 reactions in the full pathway
- PWY66-398, TCA cycle III (animals): PWY66-398
- 10 reactions found over 11 reactions in the full pathway
- PWY-6969, TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase): PWY-6969
- 9 reactions found over 12 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-athaliana
- Tool: pantograph
- Source: orthology-creinhardtii
- Tool: pantograph
- Source: orthology-synechocystis
- Tool: pantograph
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-athaliana
- Category: manual
- Source: manual-primary_network
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
- RHEA:
- PIR:
- A32472
- A49496
- A60689
- C64110
- D81399
- DEBYMC
- DEBYMM
- DEBYMP
- DEEBM
- DEECM
- DEMSMC
- DEMSMM
- DEPGMM
- DEPUGW
- DEPUMW
- DERTMM
- DETWMA
- F85551
- G01650
- H64477
- I40383
- PA0040
- PA0079
- PN0162
- S03352
- S03958
- S04956
- S04957
- S04958
- S04959
- S04960
- S04961
- S07574
- S08981
- S44167
- S52039
- S57958
- S61213
- S75735
- T03272
- T06325
- T06326
- T06327
- T06328
- T06386
- T08015
- T08077
- T08177
- T09228
- T09263
- T09286
- T09291
- T09294
- T12433
- T18570
- T45206
- T45208
- T49932
- T51311
- T51862
- LIGAND-RXN:
- UNIPROT:
- Q07841
- P33163
- P44427
- Q9PHY2
- P22133
- P17505
- P32419
- P25077
- P14152
- Q8R1P0
- P19446
- P17783
- P04636
- P58408
- Q58820
- P49814
- Q93ZA7
- Q7M4Y9
- Q7M4Z0
- P10887
- P11386
- P19983
- P19981
- P19979
- P19977
- P19982
- P19978
- P19980
- P16142
- P46487
- P46488
- Q43744
- Q59202
- Q55383
- Q42972
- O81278
- O81279
- O65363
- O65364
- O81609
- Q43743
- Q42686
- P93106
- Q04820
- O48903
- O48904
- O48905
- O48906
- O24047
- Q9XTB4
- P50917
- Q49981
- Q9ZP05
- Q9ZP06
- Q9SN86