Difference between revisions of "TRNA-URACIL-5--METHYLTRANSFERASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1126 RXN-1126] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/6....")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRNA-URACIL-5--METHYLTRANSFERASE-RXN TRNA-URACIL-5--METHYLTRANSFERASE-RXN] == * direction: ** LEFT-...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1126 RXN-1126] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRNA-URACIL-5--METHYLTRANSFERASE-RXN TRNA-URACIL-5--METHYLTRANSFERASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.2.1.12 EC-6.2.1.12]
+
** [http://enzyme.expasy.org/EC/2.1.1.35 EC-2.1.1.35]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-676]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[CAFFEOYL-COA]][c]
+
** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[Uracil-54-in-tRNA]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[tRNA-containing-5Me-uridine54]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 trans-caffeate[c] '''+''' 1 ATP[c] '''+''' 1 coenzyme A[c] '''=>''' 1 diphosphate[c] '''+''' 1 AMP[c] '''+''' 1 trans-caffeoyl-CoA[c]
+
** 1 S-adenosyl-L-methionine[c] '''+''' 1 a uracil54 in tRNA[c] '''=>''' 1 H+[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 a 5-methyluracil54 in tRNA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_12275]]
+
* Gene: [[Tiso_gene_4332]]
−
** [[pantograph]]-[[athaliana]]
+
** Source: [[orthology-esiliculosus]]
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_14183]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-1121]], suberin monomers biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121]
 
−
** '''9''' reactions found over '''19''' reactions in the full pathway
 
−
* [[PWY-7398]], coumarins biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7398 PWY-7398]
 
−
** '''3''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-6673]], caffeoylglucarate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6673 PWY-6673]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[esiliculosus]]
+
*** Tool: [[pantograph]]
−
*** [[athaliana]]
+
 
== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01943 R01943]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00594 R00594]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P23003 P23003]
 +
** [http://www.uniprot.org/uniprot/P31812 P31812]
 +
** [http://www.uniprot.org/uniprot/Q9PP92 Q9PP92]
 +
** [http://www.uniprot.org/uniprot/Q9JT82 Q9JT82]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-6.2.1.12}}
+
{{#set: ec number=EC-2.1.1.35}}
−
{{#set: gene associated=Tiso_gene_12275|Tiso_gene_14183}}
+
{{#set: gene associated=Tiso_gene_4332}}
−
{{#set: in pathway=PWY-1121|PWY-7398|PWY-6673}}
+
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-esiliculosus}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=esiliculosus|athaliana}}
 

Latest revision as of 20:09, 21 March 2018

Reaction TRNA-URACIL-5--METHYLTRANSFERASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




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