Difference between revisions of "C1"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.5.1.27-RXN 3.5.1.27-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** polypeptide_deformyla...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=C1 C1] == * smiles: ** CC(C(=O)NC(C)C([O-])=O)NC(=O)C(CCCC([N+])C(=O)[O-])NC(=O)CCC(C(=O)[O-])N...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.5.1.27-RXN 3.5.1.27-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=C1 C1] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CC(C(=O)NC(C)C([O-])=O)NC(=O)C(CCCC([N+])C(=O)[O-])NC(=O)CCC(C(=O)[O-])NC(=O)C(C)NC(=O)C(C)OC1(C(O)C(CO)OC(C(NC(=O)C)1)OP([O-])(OP([O-])(OCC2(C(O)C(O)C(O2)N3(C=CC(=O)NC(=O)3)))=O)=O)
 
* common name:
 
* common name:
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** polypeptide_deformylase
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** UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
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* ec number:
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* inchi key:
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** [http://enzyme.expasy.org/EC/3.5.1.88 EC-3.5.1.88]
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** InChIKey=IMWOXEZVYQDRDF-MCZXNMLPSA-J
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* molecular weight:
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** 1189.924   
 
* Synonym(s):
 
* Synonym(s):
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** UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
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** UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminoheptanedioate- D-alanyl-D-alanine
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[PHOSNACMURPENTATRANS-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[Charged-fMET-tRNAs]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[FORMATE]][c] '''+''' 1 [[L-Methionylaminoacyl-tRNAs]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 H2O[c] '''+''' 1 an N-formyl-L-methionylaminoacyl-tRNA[c] '''=>''' 1 H+[c] '''+''' 1 formate[c] '''+''' 1 a L-methionylaminoacyl-tRNA[c]
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−
 
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_14998]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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* PUBCHEM:
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** [http://www.genome.jp/dbget-bin/www_bget?R04268 R04268]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25244658 25244658]
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* UNIPROT:
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* CHEBI:
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** [http://www.uniprot.org/uniprot/P44786 P44786]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=61386 61386]
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** [http://www.uniprot.org/uniprot/P0A6K3 P0A6K3]
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* BIGG : ugmda
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{{#set: direction=LEFT-TO-RIGHT}}
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* LIGAND-CPD:
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{{#set: common name=polypeptide_deformylase}}
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** [http://www.genome.jp/dbget-bin/www_bget?C04882 C04882]
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{{#set: ec number=EC-3.5.1.88}}
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{{#set: smiles=CC(C(=O)NC(C)C([O-])=O)NC(=O)C(CCCC([N+])C(=O)[O-])NC(=O)CCC(C(=O)[O-])NC(=O)C(C)NC(=O)C(C)OC1(C(O)C(CO)OC(C(NC(=O)C)1)OP([O-])(OP([O-])(OCC2(C(O)C(O)C(O2)N3(C=CC(=O)NC(=O)3)))=O)=O)}}
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{{#set: gene associated=Tiso_gene_14998}}
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{{#set: common name=UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine}}
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{{#set: in pathway=}}
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{{#set: inchi key=InChIKey=IMWOXEZVYQDRDF-MCZXNMLPSA-J}}
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{{#set: reconstruction category=annotation}}
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{{#set: molecular weight=1189.924    }}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: common name=UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine|UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminoheptanedioate- D-alanyl-D-alanine}}
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{{#set: reconstruction source=in-silico_annotation}}
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{{#set: consumed by=PHOSNACMURPENTATRANS-RXN}}

Latest revision as of 20:09, 21 March 2018

Metabolite C1

  • smiles:
    • CC(C(=O)NC(C)C([O-])=O)NC(=O)C(CCCC([N+])C(=O)[O-])NC(=O)CCC(C(=O)[O-])NC(=O)C(C)NC(=O)C(C)OC1(C(O)C(CO)OC(C(NC(=O)C)1)OP([O-])(OP([O-])(OCC2(C(O)C(O)C(O2)N3(C=CC(=O)NC(=O)3)))=O)=O)
  • common name:
    • UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
  • inchi key:
    • InChIKey=IMWOXEZVYQDRDF-MCZXNMLPSA-J
  • molecular weight:
    • 1189.924
  • Synonym(s):
    • UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
    • UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminoheptanedioate- D-alanyl-D-alanine

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CC(C(=O)NC(C)C([O-])=O)NC(=O)C(CCCC([N+])C(=O)[O-])NC(=O)CCC(C(=O)[O-])NC(=O)C(C)NC(=O)C(C)OC1(C(O)C(CO)OC(C(NC(=O)C)1)OP([O-])(OP([O-])(OCC2(C(O)C(O)C(O2)N3(C=CC(=O)NC(=O)3)))=O)=O)" cannot be used as a page name in this wiki.



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