Difference between revisions of "Tiso gene 2142"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLGLUTACONYL-COA-HYDRATASE-RXN METHYLGLUTACONYL-COA-HYDRATASE-RXN] == * direction: ** REVERSIBL...")
 
(Created page with "Category:Gene == Gene Tiso_gene_2142 == * right end position: ** 8691 * transcription direction: ** POSITIVE * left end position: ** 5697 * centisome position: ** 25.41148...")
 
(4 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLGLUTACONYL-COA-HYDRATASE-RXN METHYLGLUTACONYL-COA-HYDRATASE-RXN] ==
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== Gene Tiso_gene_2142 ==
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* direction:
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* right end position:
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** REVERSIBLE
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** 8691
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/4.2.1.18 EC-4.2.1.18]
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** POSITIVE
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* left end position:
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** 5697
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* centisome position:
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** 25.41148   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-1225]]
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** 1 [[3-HYDROXY-3-METHYL-GLUTARYL-COA]][c] '''<=>''' 1 [[TRANS-3-METHYL-GLUTACONYL-COA]][c] '''+''' 1 [[WATER]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 (S)-3-hydroxy-3-methylglutaryl-CoA[c] '''<=>''' 1 3-methylglutaconyl-CoA[c] '''+''' 1 H2O[c]
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* Reaction: [[RXN-1226]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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== Pathways  ==
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* Reaction: [[RXN-16634]]
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* [[LEU-DEG2-PWY]], L-leucine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=LEU-DEG2-PWY LEU-DEG2-PWY]
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** Source: [[annotation-in-silico_annotation]]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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*** Assignment: ec-number
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* [[PWY-7571]], ferrichrome A biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7571 PWY-7571]
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* Reaction: [[RXN-16635]]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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** Source: [[annotation-in-silico_annotation]]
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== Reconstruction information  ==
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*** Assignment: ec-number
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* [[annotation]]:
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* Reaction: [[RXN-18302]]
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** [[pathwaytools]]:
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** Source: [[annotation-in-silico_annotation]]
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*** [[experimental_annotation]]
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*** Assignment: ec-number
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*** [[in-silico_annotation]]
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* Reaction: [[RXN-9721]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-7840]]
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* [[PWY-401]]
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* [[PWY-7666]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=8691}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21536 21536]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=5697}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02085 R02085]
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{{#set: centisome position=25.41148    }}
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{{#set: direction=REVERSIBLE}}
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{{#set: reaction associated=RXN-1225|RXN-1226|RXN-16634|RXN-16635|RXN-18302|RXN-9721}}
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{{#set: ec number=EC-4.2.1.18}}
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{{#set: pathway associated=PWY-7840|PWY-401|PWY-7666}}
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{{#set: in pathway=LEU-DEG2-PWY|PWY-7571}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 19:19, 21 March 2018

Gene Tiso_gene_2142

  • right end position:
    • 8691
  • transcription direction:
    • POSITIVE
  • left end position:
    • 5697
  • centisome position:
    • 25.41148
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_2142&oldid=40926"