Difference between revisions of "RXN-17787"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_13382 == * left end position: ** 145 * transcription direction: ** POSITIVE * right end position: ** 4679 * centisome position: ** 2.289594...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17787 RXN-17787] == * direction: ** LEFT-TO-RIGHT * common name: ** acetyl-_c-acetyltransferase...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Category:Gene]]
+
[[Category:Reaction]]
== Gene Tiso_gene_13382 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17787 RXN-17787] ==
* left end position:
+
* direction:
** 145
+
** LEFT-TO-RIGHT
* transcription direction:
+
* common name:
** POSITIVE
+
** acetyl-_c-acetyltransferase
* right end position:
+
** 3-ketoacyl-_thiolase
** 4679
+
** thiolase
* centisome position:
+
* ec number:
** 2.2895942   
+
** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
 
* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
+
== Reaction Formula ==
* [[PORPHOBILSYNTH-RXN]]
+
* With identifiers:
** in-silico_annotation
+
** 1 [[CPD-19160]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[CPD-10269]][c] '''+''' 1 [[ACETYL-COA]][c]
***ec-number
+
* With common name(s):
** experimental_annotation
+
** 1 3-oxo-(11Z)-octadecenoyl-CoA[c] '''+''' 1 coenzyme A[c] '''=>''' 1 palmitoleoyl-CoA[c] '''+''' 1 acetyl-CoA[c]
***ec-number
+
 
** [[pantograph]]-[[athaliana]]
+
== Genes associated with this reaction  ==
** [[pantograph]]-[[synechocystis]]
+
Genes have been associated with this reaction based on different elements listed below.
** [[pantograph]]-[[esiliculosus]]
+
* Gene: [[Tiso_gene_17451]]
** [[pantograph]]-[[creinhardtii]]
+
** Source: [[annotation-in-silico_annotation]]
== Pathways associated ==
+
*** Assignment: EC-NUMBER
* [[PWY-5189]]
+
** Source: [[annotation-experimental_annotation]]
* [[PWY-5188]]
+
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_10116]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_3856]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_15327]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_3855]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways ==
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
{{#set: left end position=145}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: transcription direction=POSITIVE}}
+
{{#set: common name=acetyl-_c-acetyltransferase}}
{{#set: right end position=4679}}
+
{{#set: common name=3-ketoacyl-_thiolase}}
{{#set: centisome position=2.2895942    }}
+
{{#set: common name=thiolase}}
{{#set: reaction associated=PORPHOBILSYNTH-RXN}}
+
{{#set: ec number=EC-2.3.1.16}}
{{#set: pathway associated=PWY-5189|PWY-5188}}
+
{{#set: gene associated=Tiso_gene_17451|Tiso_gene_10116|Tiso_gene_3856|Tiso_gene_15327|Tiso_gene_3855}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:10, 21 March 2018

Reaction RXN-17787

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • acetyl-_c-acetyltransferase
    • 3-ketoacyl-_thiolase
    • thiolase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 3-oxo-(11Z)-octadecenoyl-CoA[c] + 1 coenzyme A[c] => 1 palmitoleoyl-CoA[c] + 1 acetyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links