Difference between revisions of "ARYLFORMAMIDASE-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_4975 == * left end position: ** 8336 * transcription direction: ** POSITIVE * right end position: ** 12260 * centisome position: ** 59.1835...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARYLFORMAMIDASE-RXN ARYLFORMAMIDASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://e...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_4975 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARYLFORMAMIDASE-RXN ARYLFORMAMIDASE-RXN] ==
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* left end position:
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* direction:
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** 8336
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** LEFT-TO-RIGHT
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* transcription direction:
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* ec number:
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** POSITIVE
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** [http://enzyme.expasy.org/EC/3.5.1.9 EC-3.5.1.9]
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* right end position:
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** 12260
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* centisome position:
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** 59.183525   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[CARBPSYN-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[WATER]][c] '''+''' 1 [[N-FORMYLKYNURENINE]][c] '''=>''' 1 [[FORMATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-14736]][c]
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***ec-number
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* With common name(s):
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** experimental_annotation
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** 1 H2O[c] '''+''' 1 N-formylkynurenine[c] '''=>''' 1 formate[c] '''+''' 1 H+[c] '''+''' 1 L-kynurenine[c]
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***automated-name-match
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* [[GLUTAMIN-RXN]]
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== Genes associated with this reaction  ==
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** in-silico_annotation
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Genes have been associated with this reaction based on different elements listed below.
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***ec-number
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* Gene: [[Tiso_gene_16921]]
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** experimental_annotation
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** Source: [[orthology-creinhardtii]]
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***automated-name-match
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== Pathways  ==
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* [[RXN-13202]]
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* [[PWY-7765]], 3-hydroxy-4-methyl-anthranilate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7765 PWY-7765]
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** in-silico_annotation
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** '''2''' reactions found over '''5''' reactions in the full pathway
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***ec-number
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* [[PWY-5651]], L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5651 PWY-5651]
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** experimental_annotation
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** '''4''' reactions found over '''5''' reactions in the full pathway
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***ec-number
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* [[TRPCAT-PWY]], L-tryptophan degradation I (via anthranilate): [http://metacyc.org/META/NEW-IMAGE?object=TRPCAT-PWY TRPCAT-PWY]
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* [[RXN-14196]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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** in-silico_annotation
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* [[PWY-6309]], L-tryptophan degradation XI (mammalian, via kynurenine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6309 PWY-6309]
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***ec-number
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** '''9''' reactions found over '''17''' reactions in the full pathway
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** experimental_annotation
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* [[PWY-7717]], 3-hydroxy-4-methyl-anthranilate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7717 PWY-7717]
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***ec-number
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** '''2''' reactions found over '''6''' reactions in the full pathway
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* [[RXN-16909]]
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== Reconstruction information  ==
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** in-silico_annotation
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* Category: [[orthology]]
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***ec-number
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** Source: [[orthology-creinhardtii]]
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** experimental_annotation
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*** Tool: [[pantograph]]
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***ec-number
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* [[RXN-16910]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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== Pathways associated ==
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* [[PWY-4984]]
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* [[GLUTAMINDEG-PWY]]
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* [[ARGSYN-PWY]]
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* [[PWY-5154]]
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* [[PWY-7790]]
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* [[ARGSYNBSUB-PWY]]
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* [[PWY-7693]]
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* [[PWY-7400]]
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* [[PWY-7791]]
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* [[PWY-5686]]
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* [[CITRULBIO-PWY]]
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== External links  ==
 
== External links  ==
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{{#set: left end position=8336}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13009 13009]
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{{#set: right end position=12260}}
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* LIGAND-RXN:
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{{#set: centisome position=59.183525    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R01959 R01959]
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{{#set: reaction associated=CARBPSYN-RXN|GLUTAMIN-RXN|RXN-13202|RXN-14196|RXN-16909|RXN-16910}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: pathway associated=PWY-4984|GLUTAMINDEG-PWY|ARGSYN-PWY|PWY-5154|PWY-7790|ARGSYNBSUB-PWY|PWY-7693|PWY-7400|PWY-7791|PWY-5686|CITRULBIO-PWY}}
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{{#set: ec number=EC-3.5.1.9}}
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{{#set: gene associated=Tiso_gene_16921}}
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{{#set: in pathway=PWY-7765|PWY-5651|TRPCAT-PWY|PWY-6309|PWY-7717}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-creinhardtii}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 21:10, 21 March 2018

Reaction ARYLFORMAMIDASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7765, 3-hydroxy-4-methyl-anthranilate biosynthesis II: PWY-7765
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-5651, L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde: PWY-5651
    • 4 reactions found over 5 reactions in the full pathway
  • TRPCAT-PWY, L-tryptophan degradation I (via anthranilate): TRPCAT-PWY
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6309, L-tryptophan degradation XI (mammalian, via kynurenine): PWY-6309
    • 9 reactions found over 17 reactions in the full pathway
  • PWY-7717, 3-hydroxy-4-methyl-anthranilate biosynthesis I: PWY-7717
    • 2 reactions found over 6 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=ARYLFORMAMIDASE-RXN&oldid=46497"