Difference between revisions of "RXN0-5184"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-527 RXN-527] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1.14...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5184 RXN0-5184] == * direction: ** LEFT-TO-RIGHT * common name: ** thymidine_phosphorylase * e...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-527 RXN-527] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5184 RXN0-5184] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** thymidine_phosphorylase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.14.11.23 EC-1.14.11.23]
+
** [http://enzyme.expasy.org/EC/2.4.1.1 EC-2.4.1.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-474]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-520]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[SUC]][c] '''+''' 1 [[WATER]][c]
+
** 1 [[Pi]][c] '''+''' 1 [[1-4-alpha-D-Glucan]][c] '''=>''' 1 [[1-4-alpha-D-Glucan]][c] '''+''' 1 [[GLC-1-P]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 (+)-taxifolin[c] '''+''' 1 2-oxoglutarate[c] '''+''' 1 oxygen[c] '''=>''' 1 quercetin[c] '''+''' 1 CO2[c] '''+''' 1 succinate[c] '''+''' 1 H2O[c]
+
** 1 phosphate[c] '''+''' 1 a 1,4-α-D-glucan[c] '''=>''' 1 a 1,4-α-D-glucan[c] '''+''' 1 α-D-glucopyranose 1-phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_3330]]
+
* Gene: [[Tiso_gene_1011]]
−
** [[pantograph]]-[[athaliana]]
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-3101]], flavonol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3101 PWY-3101]
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-5390]], rutin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5390 PWY-5390]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6787]], flavonoid biosynthesis (in equisetum): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6787 PWY-6787]
 
−
** '''5''' reactions found over '''10''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[esiliculosus]]
+
*** Tool: [[pathwaytools]]
−
*** [[athaliana]]
+
 
== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02160 R02160]
+
** [http://www.genome.jp/dbget-bin/www_bget?R06050 R06050]
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01821 R01821]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q9SD76 Q9SD76]
 +
** [http://www.uniprot.org/uniprot/P53537 P53537]
 +
** [http://www.uniprot.org/uniprot/Q42863 Q42863]
 +
** [http://www.uniprot.org/uniprot/P27598 P27598]
 +
** [http://www.uniprot.org/uniprot/O24363 O24363]
 +
** [http://www.uniprot.org/uniprot/P73546 P73546]
 +
** [http://www.uniprot.org/uniprot/P73511 P73511]
 +
** [http://www.uniprot.org/uniprot/P06738 P06738]
 +
** [http://www.uniprot.org/uniprot/P39123 P39123]
 +
** [http://www.uniprot.org/uniprot/P09812 P09812]
 +
** [http://www.uniprot.org/uniprot/P53535 P53535]
 +
** [http://www.uniprot.org/uniprot/Q9PSQ9 Q9PSQ9]
 +
** [http://www.uniprot.org/uniprot/P09811 P09811]
 +
** [http://www.uniprot.org/uniprot/Q00766 Q00766]
 +
** [http://www.uniprot.org/uniprot/Q7M385 Q7M385]
 +
** [http://www.uniprot.org/uniprot/P00489 P00489]
 +
** [http://www.uniprot.org/uniprot/P04045 P04045]
 +
** [http://www.uniprot.org/uniprot/P00490 P00490]
 +
** [http://www.uniprot.org/uniprot/P0AC86 P0AC86]
 +
** [http://www.uniprot.org/uniprot/Q9PKE6 Q9PKE6]
 +
** [http://www.uniprot.org/uniprot/Q9CHM8 Q9CHM8]
 +
** [http://www.uniprot.org/uniprot/P45180 P45180]
 +
** [http://www.uniprot.org/uniprot/Q9Z8N1 Q9Z8N1]
 +
** [http://www.uniprot.org/uniprot/O84250 O84250]
 +
** [http://www.uniprot.org/uniprot/P34114 P34114]
 +
** [http://www.uniprot.org/uniprot/P32811 P32811]
 +
** [http://www.uniprot.org/uniprot/P11216 P11216]
 +
** [http://www.uniprot.org/uniprot/P11217 P11217]
 +
** [http://www.uniprot.org/uniprot/P06737 P06737]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-1.14.11.23}}
+
{{#set: common name=thymidine_phosphorylase}}
−
{{#set: gene associated=Tiso_gene_3330}}
+
{{#set: ec number=EC-2.4.1.1}}
−
{{#set: in pathway=PWY-3101|PWY-5390|PWY-6787}}
+
{{#set: gene associated=Tiso_gene_1011}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: in pathway=}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction source=esiliculosus|athaliana}}
+
{{#set: reconstruction source=annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 21:10, 21 March 2018

Reaction RXN0-5184

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • thymidine_phosphorylase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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