Difference between revisions of "GLUTSEMIALDEHYDROG-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=FORMATE FORMATE] == * smiles: ** [CH]([O-])=O * inchi key: ** InChIKey=BDAGIHXWWSANSR-UHFFFAOYS...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTSEMIALDEHYDROG-RXN GLUTSEMIALDEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** g...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=FORMATE FORMATE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTSEMIALDEHYDROG-RXN GLUTSEMIALDEHYDROG-RXN] ==
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* smiles:
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* direction:
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** [CH]([O-])=O
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=BDAGIHXWWSANSR-UHFFFAOYSA-M
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* common name:
 
* common name:
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** formate
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** glutamate-5-semialdehyde_dehydrogenase
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* molecular weight:
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* ec number:
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** 45.018   
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** [http://enzyme.expasy.org/EC/1.2.1.41 EC-1.2.1.41]
 
* Synonym(s):
 
* Synonym(s):
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** formic acid
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[FTHFL]]
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* With identifiers:
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* [[FORMATETHFLIG-RXN]]
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** 1 [[L-GLUTAMATE-5-P]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[L-GLUTAMATE_GAMMA-SEMIALDEHYDE]][c]
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* [[Forthi]]
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* With common name(s):
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== Reaction(s) known to produce the compound ==
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** 1 γ-L-glutamyl 5-phosphate[c] '''+''' 1 H+[c] '''+''' 1 NADPH[c] '''=>''' 1 NADP+[c] '''+''' 1 phosphate[c] '''+''' 1 L-glutamate-5-semialdehyde[c]
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* [[3.5.1.88-RXN]]
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* [[RXN3O-130]]
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== Genes associated with this reaction  ==
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* [[ARYLFORMAMIDASE-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[GTP-CYCLOHYDRO-I-RXN]]
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* Gene: [[Tiso_gene_16634]]
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* [[Forthi]]
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** Source: [[orthology-athaliana]]
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* [[RXN-11881]]
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** Source: [[orthology-synechocystis]]
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* [[OXALATE-DECARBOXYLASE-RXN]]
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** Source: [[orthology-esiliculosus]]
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* [[OBFOOLor]]
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** Source: [[orthology-creinhardtii]]
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* [[3.5.1.27-RXN]]
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* Gene: [[Tiso_gene_16258]]
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* [[S-FORMYLGLUTATHIONE-HYDROLASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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* [[FORMYLMETHIONINE-DEFORMYLASE-RXN]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* [[RXN66-305]]
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== Pathways  ==
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* [[RXN-13707]]
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* [[PWY-6922]], L-Nδ-acetylornithine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6922 PWY-6922]
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* [[RXN66-13]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[RXN-13961]]
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* [[PROSYN-PWY]], L-proline biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PROSYN-PWY PROSYN-PWY]
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* [[FORMAMIDASE-RXN]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[DIOHBUTANONEPSYN-RXN]]
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* [[PWY-3341]], L-proline biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3341 PWY-3341]
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* [[1.14.13.70-RXN]]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[GTP-CYCLOHYDRO-II-RXN]]
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* [[ARGININE-SYN4-PWY]], L-ornithine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=ARGININE-SYN4-PWY ARGININE-SYN4-PWY]
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== Reaction(s) of unknown directionality ==
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[CITRULBIO-PWY]], L-citrulline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=CITRULBIO-PWY CITRULBIO-PWY]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CAS : 64-18-6
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* RHEA:
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* METABOLIGHTS : MTBLC15740
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19541 19541]
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=283 283]
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** [http://www.genome.jp/dbget-bin/www_bget?R03313 R03313]
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* HMDB : HMDB00142
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* UNIPROT:
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/Q9JUK8 Q9JUK8]
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** [http://www.genome.jp/dbget-bin/www_bget?C00058 C00058]
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** [http://www.uniprot.org/uniprot/P45121 P45121]
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/P53000 P53000]
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** [http://www.chemspider.com/Chemical-Structure.277.html 277]
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** [http://www.uniprot.org/uniprot/P07004 P07004]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/P17857 P17857]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=15740 15740]
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** [http://www.uniprot.org/uniprot/P45638 P45638]
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* BIGG : for
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** [http://www.uniprot.org/uniprot/P54885 P54885]
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{{#set: smiles=[CH]([O-])=O}}
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** [http://www.uniprot.org/uniprot/O04226 O04226]
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{{#set: inchi key=InChIKey=BDAGIHXWWSANSR-UHFFFAOYSA-M}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=formate}}
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{{#set: common name=glutamate-5-semialdehyde_dehydrogenase}}
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{{#set: molecular weight=45.018    }}
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{{#set: ec number=EC-1.2.1.41}}
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{{#set: common name=formic acid}}
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{{#set: gene associated=Tiso_gene_16634|Tiso_gene_16258}}
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{{#set: consumed by=FTHFL|FORMATETHFLIG-RXN|Forthi}}
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{{#set: in pathway=PWY-6922|PROSYN-PWY|PWY-3341|ARGININE-SYN4-PWY|CITRULBIO-PWY}}
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{{#set: produced by=3.5.1.88-RXN|RXN3O-130|ARYLFORMAMIDASE-RXN|GTP-CYCLOHYDRO-I-RXN|Forthi|RXN-11881|OXALATE-DECARBOXYLASE-RXN|OBFOOLor|3.5.1.27-RXN|S-FORMYLGLUTATHIONE-HYDROLASE-RXN|FORMYLMETHIONINE-DEFORMYLASE-RXN|RXN66-305|RXN-13707|RXN66-13|RXN-13961|FORMAMIDASE-RXN|DIOHBUTANONEPSYN-RXN|1.14.13.70-RXN|GTP-CYCLOHYDRO-II-RXN}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 21:10, 21 March 2018

Reaction GLUTSEMIALDEHYDROG-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • glutamate-5-semialdehyde_dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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