Difference between revisions of "Tiso gene 14220"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14917 RXN-14917] == * direction: ** LEFT-TO-RIGHT * common name: ** mpbq_msbq_methyltransferase...")
(Created page with "Category:Gene == Gene Tiso_gene_14220 == * right end position: ** 5704 * transcription direction: ** POSITIVE * left end position: ** 146 * centisome position: ** 2.530329...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14917 RXN-14917] ==
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== Gene Tiso_gene_14220 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 5704
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* common name:
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* transcription direction:
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** mpbq_msbq_methyltransferase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/2.1.1.295 EC-2.1.1.295]
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** 146
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* centisome position:
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** 2.5303292   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[2.4.1.213-RXN]]
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** 1 [[CPD-11712]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[CPD-15834]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c]
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** Source: [[orthology-synechocystis]]
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* With common name(s):
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* Reaction: [[RXN1G-1435]]
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** 1 2-methyl-6-geranylgeranyl-1,4-benzoquinol[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 2,3-dimethyl-6-geranylgeranyl-1,4-benzoquinol[c] '''+''' 1 H+[c] '''+''' 1 S-adenosyl-L-homocysteine[c]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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== Genes associated with this reaction  ==
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* Reaction: [[RXN1G-1436]]
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[annotation-in-silico_annotation]]
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* [[Tiso_gene_2596]]
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*** Assignment: automated-name-match
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** IN-SILICO_ANNOTATION
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* Reaction: [[RXN1G-1437]]
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***AUTOMATED-NAME-MATCH
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** Source: [[annotation-in-silico_annotation]]
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== Pathways  ==
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*** Assignment: automated-name-match
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* [[PWY-7436]], vitamin E biosynthesis (tocotrienols): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7436 PWY-7436]
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* Reaction: [[RXN1G-1438]]
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** '''1''' reactions found over '''6''' reactions in the full pathway
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** Source: [[annotation-in-silico_annotation]]
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== Reconstruction information  ==
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*** Assignment: automated-name-match
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* [[annotation]]:
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* Reaction: [[RXN1G-1439]]
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** [[pathwaytools]]:
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** Source: [[annotation-in-silico_annotation]]
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*** [[in-silico_annotation]]
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*** Assignment: automated-name-match
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* Reaction: [[TREHALOSE6PSYN-RXN]]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[TREHALOSEPHOSPHA-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[UG6PGT]]
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** Source: [[orthology-creinhardtii]]
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* Reaction: [[UG6PGTn]]
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** Source: [[orthology-creinhardtii]]
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== Pathways associated ==
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* [[TREHALOSESYN-PWY]]
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* [[PWYG-321]]
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* [[PWY-881]]
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* [[TRESYN-PWY]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=5704}}
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{{#set: common name=mpbq_msbq_methyltransferase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: ec number=EC-2.1.1.295}}
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{{#set: left end position=146}}
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{{#set: gene associated=Tiso_gene_2596}}
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{{#set: centisome position=2.5303292    }}
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{{#set: in pathway=PWY-7436}}
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{{#set: reaction associated=2.4.1.213-RXN|RXN1G-1435|RXN1G-1436|RXN1G-1437|RXN1G-1438|RXN1G-1439|TREHALOSE6PSYN-RXN|TREHALOSEPHOSPHA-RXN|UG6PGT|UG6PGTn}}
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{{#set: reconstruction category=annotation}}
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{{#set: pathway associated=TREHALOSESYN-PWY|PWYG-321|PWY-881|TRESYN-PWY}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 20:10, 21 March 2018

Gene Tiso_gene_14220

  • right end position:
    • 5704
  • transcription direction:
    • POSITIVE
  • left end position:
    • 146
  • centisome position:
    • 2.5303292
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_14220&oldid=46537"