Difference between revisions of "R524-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=KDOTRANS-RXN KDOTRANS-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-deoxy-d-manno-octul...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=R524-RXN R524-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** cyanate_hydratase * ec number...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=R524-RXN R524-RXN] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** cyanate_hydratase |
* ec number: | * ec number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/4.2.1.104 EC-4.2.1.104] |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[PROTON]][c] '''+''' 1 [[CPD-69]][c] '''+''' 1 [[HCO3]][c] '''=>''' 1 [[CARBAMATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 H+[c] '''+''' 1 cyanate[c] '''+''' 1 hydrogencarbonate[c] '''=>''' 1 carbamate[c] '''+''' 1 CO2[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * Gene: [[Tiso_gene_15128]] |
| − | ** | + | ** Source: [[annotation-in-silico_annotation]] |
| − | ***AUTOMATED-NAME-MATCH | + | *** Assignment: AUTOMATED-NAME-MATCH |
| − | * [[ | + | ** Source: [[annotation-experimental_annotation]] |
| − | + | *** Assignment: AUTOMATED-NAME-MATCH | |
| − | ***AUTOMATED-NAME-MATCH | + | ** Source: [[orthology-athaliana]] |
| − | ** [[ | + | |
== Pathways == | == Pathways == | ||
| − | * [[ | + | * [[CYANCAT-PWY]], cyanate degradation: [http://metacyc.org/META/NEW-IMAGE?object=CYANCAT-PWY CYANCAT-PWY] |
| − | ** ''' | + | ** '''3''' reactions found over '''3''' reactions in the full pathway |
| − | + | ||
| − | + | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[orthology]] | + | * Category: [[orthology]] |
| − | ** [[ | + | ** Source: [[orthology-athaliana]] |
| − | *** [[ | + | *** Tool: [[pantograph]] |
| − | * [[annotation]]: | + | * Category: [[annotation]] |
| − | ** [[pathwaytools]]: | + | ** Source: [[annotation-in-silico_annotation]] |
| − | *** [[ | + | *** Tool: [[pathwaytools]] |
| + | ** Source: [[annotation-experimental_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18489 18489] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
| − | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R03546 R03546] |
| + | * UNIPROT: | ||
| + | ** [http://www.uniprot.org/uniprot/P00816 P00816] | ||
| + | ** [http://www.uniprot.org/uniprot/Q55367 Q55367] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: common name= | + | {{#set: common name=cyanate_hydratase}} |
| − | {{#set: ec number=EC- | + | {{#set: ec number=EC-4.2.1.104}} |
| − | {{#set: gene associated= | + | {{#set: gene associated=Tiso_gene_15128}} |
| − | {{#set: in pathway= | + | {{#set: in pathway=CYANCAT-PWY}} |
| − | {{#set: reconstruction category=orthology | + | {{#set: reconstruction category=orthology|annotation}} |
| − | + | {{#set: reconstruction source=annotation-in-silico_annotation|orthology-athaliana|annotation-experimental_annotation}} | |
| − | {{#set: reconstruction source=athaliana | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
| − | + | ||
| − | {{#set: reconstruction tool=pathwaytools | + | |
| − | + | ||
Latest revision as of 20:11, 21 March 2018
Contents
Reaction R524-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- cyanate_hydratase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 PROTON[c] + 1 CPD-69[c] + 1 HCO3[c] => 1 CARBAMATE[c] + 1 CARBON-DIOXIDE[c]
- With common name(s):
- 1 H+[c] + 1 cyanate[c] + 1 hydrogencarbonate[c] => 1 carbamate[c] + 1 CO2[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_15128
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-experimental_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: orthology-athaliana
- Source: annotation-in-silico_annotation
Pathways
- CYANCAT-PWY, cyanate degradation: CYANCAT-PWY
- 3 reactions found over 3 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-athaliana
- Tool: pantograph
- Source: orthology-athaliana
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
