Difference between revisions of "Tiso gene 8720"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-468 RXN1G-468] == * direction: ** LEFT-TO-RIGHT * common name: ** trans-delta2-cis,cis-delta7...")
(Created page with "Category:Gene == Gene Tiso_gene_8720 == * right end position: ** 2159 * transcription direction: ** POSITIVE * left end position: ** 62 * centisome position: ** 0.6227401...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-468 RXN1G-468] ==
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== Gene Tiso_gene_8720 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 2159
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* common name:
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* transcription direction:
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** trans-delta2-cis,cis-delta7,25-C44:3-[acyl-carrier protein] reductase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/1.3.1.M4 EC-1.3.1.M4]
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** 62
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* centisome position:
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** 0.6227401   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[2PGADEHYDRAT-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[trans-D2-cis-cis-D7-25-C44-3-ACPs]][c] '''+''' 1 [[NADH]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[cis-cis-D7-25-C44-2-ACPs]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 H+[c] '''+''' 1 a trans-delta2-cis,cis-delta7,25-C44:3-[acp][c] '''+''' 1 NADH[c] '''=>''' 1 NAD+[c] '''+''' 1 a cis,cis-delta7,25-C44:2-[acp][c]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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== Genes associated with this reaction  ==
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** Source: [[orthology-athaliana]]
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[orthology-athaliana]]
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* [[Tiso_gene_10778]]
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** Source: [[orthology-synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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** Source: [[orthology-creinhardtii]]
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* [[PWYG-321]], mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYG-321 PWYG-321]
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** Source: [[orthology-creinhardtii]]
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** '''86''' reactions found over '''182''' reactions in the full pathway
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** Source: [[orthology-creinhardtii]]
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== Reconstruction information  ==
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* Reaction: [[3-DEHYDROQUINATE-DEHYDRATASE-RXN]]
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* [[orthology]]:
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** Source: [[orthology-athaliana]]
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** [[pantograph]]:
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** Source: [[orthology-esiliculosus]]
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*** [[esiliculosus]]
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== Pathways associated ==
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* [[GLYCOLYSIS]]
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* [[PWY-6901]]
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* [[P124-PWY]]
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* [[PWY-6886]]
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* [[P341-PWY]]
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* [[PWY-1622]]
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* [[GLUCONEO-PWY]]
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* [[PWY66-399]]
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* [[PWY-1042]]
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* [[NPGLUCAT-PWY]]
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* [[PWY-5723]]
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* [[ANAGLYCOLYSIS-PWY]]
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* [[PWY-5484]]
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* [[PWY-7124]]
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* [[PWY-6142]]
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* [[PWY-7003]]
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* [[PWY-2221]]
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* [[PWY-6416]]
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* [[PWY-6163]]
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* [[PWY-7218]]
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* [[QUINATEDEG-PWY]]
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* [[P122-PWY]]
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* [[PWY-6707]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=2159}}
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{{#set: common name=trans-delta2-cis,cis-delta7,25-C44:3-[acyl-carrier protein] reductase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: ec number=EC-1.3.1.M4}}
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{{#set: left end position=62}}
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{{#set: gene associated=Tiso_gene_10778}}
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{{#set: centisome position=0.6227401    }}
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{{#set: in pathway=PWYG-321}}
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{{#set: reaction associated=2PGADEHYDRAT-RXN|3-DEHYDROQUINATE-DEHYDRATASE-RXN}}
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{{#set: reconstruction category=orthology}}
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{{#set: pathway associated=GLYCOLYSIS|PWY-6901|P124-PWY|PWY-6886|P341-PWY|PWY-1622|GLUCONEO-PWY|PWY66-399|PWY-1042|NPGLUCAT-PWY|PWY-5723|ANAGLYCOLYSIS-PWY|PWY-5484|PWY-7124|PWY-6142|PWY-7003|PWY-2221|PWY-6416|PWY-6163|PWY-7218|QUINATEDEG-PWY|P122-PWY|PWY-6707}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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Latest revision as of 20:11, 21 March 2018

Gene Tiso_gene_8720

  • right end position:
    • 2159
  • transcription direction:
    • POSITIVE
  • left end position:
    • 62
  • centisome position:
    • 0.6227401
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_8720&oldid=46598"