Difference between revisions of "Tiso gene 16028"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.138-RXN 2.1.1.138-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec number: **...")
(Created page with "Category:Gene == Gene Tiso_gene_16028 == * right end position: ** 3492 * transcription direction: ** POSITIVE * left end position: ** 1941 * centisome position: ** 41.8228...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.138-RXN 2.1.1.138-RXN] ==
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== Gene Tiso_gene_16028 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 3492
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* common name:
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* transcription direction:
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** ORF
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/2.1.1.137 EC-2.1.1.137]
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** 1941
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* centisome position:
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** 41.822884   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PEROXID-RXN]]
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** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[METHYLARSONITE]][c] '''=>''' 2 [[PROTON]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[DIMETHYLARSINATE]][c]
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** Source: [[orthology-esiliculosus]]
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* With common name(s):
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* Reaction: [[RXN-12440]]
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** 1 S-adenosyl-L-methionine[c] '''+''' 1 methylarsonite[c] '''=>''' 2 H+[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 cacodylate[c]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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== Genes associated with this reaction  ==
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* Reaction: [[RXN-14240]]
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[orthology-esiliculosus]]
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* [[Tiso_gene_16361]]
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* Reaction: [[RXN-15288]]
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** IN-SILICO_ANNOTATION
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** Source: [[orthology-esiliculosus]]
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***EC-NUMBER
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* Reaction: [[RXN-3521]]
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== Pathways ==
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-4202]], arsenate detoxification I (glutaredoxin): [http://metacyc.org/META/NEW-IMAGE?object=PWY-4202 PWY-4202]
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*** Assignment: automated-name-match
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** '''3''' reactions found over '''7''' reactions in the full pathway
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* Reaction: [[RXN-8635]]
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== Reconstruction information  ==
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** Source: [[orthology-esiliculosus]]
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* [[annotation]]:
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== Pathways associated ==
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** [[pathwaytools]]:
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* [[PWY-7214]]
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*** [[in-silico_annotation]]
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* [[PWY-6959]]
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* [[PWY-5461]]
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* [[PWY-7445]]
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* [[PWY-6960]]
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* [[PWY-6961]]
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* [[PWY-2261]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=3492}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11684 11684]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=1941}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05756 R05756]
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{{#set: centisome position=41.822884    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=PEROXID-RXN|RXN-12440|RXN-14240|RXN-15288|RXN-3521|RXN-8635}}
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{{#set: common name=ORF}}
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{{#set: pathway associated=PWY-7214|PWY-6959|PWY-5461|PWY-7445|PWY-6960|PWY-6961|PWY-2261}}
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{{#set: ec number=EC-2.1.1.137}}
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{{#set: gene associated=Tiso_gene_16361}}
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{{#set: in pathway=PWY-4202}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 20:11, 21 March 2018

Gene Tiso_gene_16028

  • right end position:
    • 3492
  • transcription direction:
    • POSITIVE
  • left end position:
    • 1941
  • centisome position:
    • 41.822884
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_16028&oldid=46616"