Difference between revisions of "Tiso gene 9140"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=URPHOS-RXN URPHOS-RXN] == * direction: ** REVERSIBLE * common name: ** uridine_phosphorylase * ec n...")
(Created page with "Category:Gene == Gene Tiso_gene_9140 == * right end position: ** 8924 * transcription direction: ** POSITIVE * left end position: ** 6694 * centisome position: ** 69.94775...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=URPHOS-RXN URPHOS-RXN] ==
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== Gene Tiso_gene_9140 ==
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* direction:
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* right end position:
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** REVERSIBLE
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** 8924
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* common name:
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* transcription direction:
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** uridine_phosphorylase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/2.4.2.2 EC-2.4.2.2]
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** 6694
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** [http://enzyme.expasy.org/EC/2.4.2.3 EC-2.4.2.3]
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* centisome position:
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** 69.947754   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-12086]]
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** 1 [[Pi]][c] '''+''' 1 [[URIDINE]][c] '''<=>''' 1 [[RIBOSE-1P]][c] '''+''' 1 [[URACIL]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 phosphate[c] '''+''' 1 uridine[c] '''<=>''' 1 &alpha;-D-ribose-1-phosphate[c] '''+''' 1 uracil[c]
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* Reaction: [[RXN-12579]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[TRIACYLGLYCEROL-LIPASE-RXN]]
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* [[Tiso_gene_20384]]
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** Source: [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** Assignment: ec-number
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***AUTOMATED-NAME-MATCH
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== Pathways associated ==
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== Pathways  ==
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* [[LIPAS-PWY]]
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* [[PWY-5532]], nucleoside and nucleotide degradation (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5532 PWY-5532]
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* [[PWY-6857]]
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** '''3''' reactions found over '''10''' reactions in the full pathway
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* [[PWY0-1295]], pyrimidine ribonucleosides degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1295 PWY0-1295]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=8924}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24388 24388]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=6694}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01876 R01876]
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{{#set: centisome position=69.947754    }}
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* UNIPROT:
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{{#set: reaction associated=RXN-12086|RXN-12579|TRIACYLGLYCEROL-LIPASE-RXN}}
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** [http://www.uniprot.org/uniprot/P52624 P52624]
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{{#set: pathway associated=LIPAS-PWY|PWY-6857}}
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** [http://www.uniprot.org/uniprot/P43770 P43770]
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** [http://www.uniprot.org/uniprot/Q16831 Q16831]
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** [http://www.uniprot.org/uniprot/P12758 P12758]
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** [http://www.uniprot.org/uniprot/P19662 P19662]
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** [http://www.uniprot.org/uniprot/O08444 O08444]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=uridine_phosphorylase}}
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{{#set: ec number=EC-2.4.2.2}}
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{{#set: ec number=EC-2.4.2.3}}
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{{#set: gene associated=Tiso_gene_20384}}
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{{#set: in pathway=PWY-5532|PWY0-1295}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 20:11, 21 March 2018

Gene Tiso_gene_9140

  • right end position:
    • 8924
  • transcription direction:
    • POSITIVE
  • left end position:
    • 6694
  • centisome position:
    • 69.947754
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_9140&oldid=46665"